RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CBLN3Q6UW01 205 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM251Q8N6I4 163 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 H1FXQ92522 213 aaKnown RBP8.25□□□□□ -1.09
HDAC9-229ENST00000622668 ZFP3Q96NJ6 502 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 NEDD4LQ96PU5 975 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 CLCC1Q96S66 551 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM38AQ9H6F2 299 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 EGLN3Q9H6Z9 239 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 NDRG4Q9ULP0 352 aaKnown RBP8.25□□□□□ -1.09
HDAC9-229ENST00000622668 PCDHGA10Q9Y5H3 936 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 ST14Q9Y5Y6 855 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 NOTCH4Q99466 2003 aa8.25□□□□□ -1.09
HDAC9-229ENST00000622668 TRBV4-1A0A0J9YWV2 114 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ALG1L2C9J202 215 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 FBP2O00757 339 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 SNAP29O95721 258 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 SLC2A1P11166 492 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF16P17020 682 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-229ENST00000622668 MAPK3P27361 379 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-229ENST00000622668 GRK5P34947 590 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 SLC37A1P57057 533 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 MS4A2Q01362 244 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 POU4F2Q12837 409 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 FAM198BQ6UWH4 519 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM108Q6UXF1 575 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 PGAP1Q75T13 922 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 DPY19L4Q7Z388 723 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 PLAC1Q9HBJ0 212 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ACER3Q9NUN7 267 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ASF1BQ9NVP2 202 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 FBXO34Q9NWN3 711 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 SMIM30A4D0T7 59 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 M0R129 80 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 SGCEO43556 437 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 CSN2P05814 226 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 CD3EP07766 207 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 LCN1P31025 176 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 CXCR4P61073 352 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ROR2Q01974 943 aaKnown RBP8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ZFP36L1Q07352 338 aaKnown RBP8.24□□□□□ -1.09
HDAC9-229ENST00000622668 RSU1Q15404 277 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 PLCXD3Q63HM9 321 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 B3GLCTQ6Y288 498 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 GOLM1Q8NBJ4 401 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 MIB2Q96AX9 1013 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM80Q96HE8 168 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 SARGQ9BW04 601 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 NOP16Q9Y3C1 178 aaKnown RBP8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ADAM18Q9Y3Q7 739 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 PYCARD-AS1I3L0S3 204 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 GRPP07492 148 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 FBXO45P0C2W1 286 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ST3GAL4Q11206 333 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ACKR1Q16570 336 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 TP53I3Q53FA7 332 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 RSBN1Q5VWQ0 802 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-229ENST00000622668 FAM205BPQ63HN1 556 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 PAMR1Q6UXH9 720 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 BEND4Q6ZU67 534 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 MOB3CQ70IA8 216 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 KLBQ86Z14 1044 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 ZFP41Q8N8Y5 198 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 OR5T2Q8NGG2 359 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 RASD2Q96D21 266 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 OXGR1Q96P68 337 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 TMEM138Q9NPI0 162 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 DIABLOQ9NR28 239 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 FKBP7Q9Y680 259 aa8.24□□□□□ -1.09
HDAC9-229ENST00000622668 A0A1B0GUH1 482 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 SLC19A2O60779 497 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ACTL6AO96019 429 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 OR8G3PP0DMU2 310 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PGAM2P15259 253 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TUBA1BP68363 451 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TUBA4AP68366 448 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MRPL28Q13084 256 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 FGFBP1Q14512 234 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PIGGQ5H8A4 983 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 GLT8D1Q68CQ7 371 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TUBA1AQ71U36 451 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MAVSQ7Z434 540 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 FAM83FQ8NEG4 500 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PFN4Q8NHR9 129 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ESRP2Q9H6T0 727 aaKnown RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 EMC7Q9NPA0 242 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 PLEKHA6Q9Y2H5 1048 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 CSPG4Q6UVK1 2322 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 C5orf49A4QMS7 147 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 ZNF593O00488 134 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-229ENST00000622668 XPNPEP2O43895 674 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 AIREO43918 545 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 OR7A10O76100 309 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 HTR3BO95264 441 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 GALNSP34059 522 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 MAGEA2P43356 314 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 RAB25P57735 213 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TAS2R43P59537 309 aa8.23□□□□□ -1.09
HDAC9-229ENST00000622668 TUBA3CQ13748 450 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms