RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SVOPQ8N4V2 548 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 TMEM80Q96HE8 168 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 TEAD3Q99594 435 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 OR51V1Q9H2C8 321 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 VCX3AQ9NNX9 186 aa23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 FGF20Q9NP95 211 aaPredicted RBP23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 WARS2Q9UGM6 360 aaKnown RBP23.32■■□□□ 1.32
SCAMP4-210ENST00000588555 ALPK2Q86TB3 2170 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 SLC22A31A6NKX4 558 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 AQP7P3A6NL99 342 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 GYPBP06028 91 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 PPIAP62937 165 aaKnown RBP23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 TBCEQ15813 527 aaPredicted RBP23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 KLHL12Q53G59 568 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 ARMC4Q5T2S8 1044 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 IGFL3Q6UXB1 125 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 B3GLCTQ6Y288 498 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 B3GNT6Q6ZMB0 384 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 GHDCQ8N2G8 530 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 EXD3Q8N9H8 876 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 MUL1Q969V5 352 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 ADGRG7Q96K78 797 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 TAS2R16Q9NYV7 291 aa23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 DIMT1Q9UNQ2 313 aaKnown RBP23.31■■□□□ 1.32
SCAMP4-210ENST00000588555 URB1O60287 2271 aaKnown RBP23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 TRAV17A0A0B4J275 112 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 A0A1W2PRG6 482 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 M0R3G1 203 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 TNFSF11O14788 317 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 APOL3O95236 402 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 STARP49675 285 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 TMED1Q13445 227 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 RNFT1Q5M7Z0 435 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 FOXB2Q5VYV0 432 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 SLC22A16Q86VW1 577 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 EXOGQ9Y2C4 368 aaKnown RBP23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 CACNA1AO00555 2505 aa23.3■■□□□ 1.32
SCAMP4-210ENST00000588555 RAMP1O60894 148 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 CLDN15P56746 228 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 CSNK2A1P68400 391 aaPredicted RBP23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 HSF1Q00613 529 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 POU3F1Q03052 451 aaPredicted RBP23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 RAB39AQ14964 217 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 ADCK1Q86TW2 530 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 ASB6Q9NWX5 421 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 TNRC6AQ8NDV7 1962 aaKnown RBP23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 KIAA1549Q9HCM3 1950 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 IRGMA1A4Y4 181 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 K7ENP7 123 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 RAB36O95755 333 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 SPI1P17947 270 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 POU3F2P20265 443 aaPredicted RBP23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 ACVR1BP36896 505 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 SLC25A1P53007 311 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 SUCLG1P53597 346 aaKnown RBP23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 RNLSQ5VYX0 342 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 INO80CQ6PI98 192 aaPredicted RBP23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 ESPNLQ6ZVH7 1005 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 TRILQ7L0X0 811 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 FAM109AQ8N4B1 249 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 ZNRF4Q8WWF5 429 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 DCBLD2Q96PD2 775 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 TUBA1CQ9BQE3 449 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 SLC6A15Q9H2J7 730 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 ACKR4Q9NPB9 350 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 HAO2Q9NYQ3 351 aa23.29■■□□□ 1.32
SCAMP4-210ENST00000588555 LOC102725191A0A1B0GVB3 256 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 H7C1C5 153 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 J3QRE1 110 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 RRP8O43159 456 aaKnown RBP23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 DNPH1O43598 174 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 EIF1BO60739 113 aaKnown RBP23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 INMTO95050 263 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 IFNGR1P15260 489 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 DCKP27707 260 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 GSTT1P30711 240 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 LCN6P62502 163 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 MELKQ14680 651 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 SLC35D2Q76EJ3 337 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 SHFQ7M4L6 423 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 OR4F15Q8NGB8 312 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 C9orf43Q8TAL5 461 aaPredicted RBP23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 ASB10Q8WXI3 467 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 SNX18Q96RF0 628 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 SRXN1Q9BYN0 137 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 ZDHHC11Q9H8X9 412 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 RPRD1BQ9NQG5 326 aaKnown RBP23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 NOX1Q9Y5S8 564 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 NCOR2Q9Y618 2525 aa23.28■■□□□ 1.32
SCAMP4-210ENST00000588555 EIF1AYO14602 144 aaKnown RBP23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 SEC14L5O43304 696 aa23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 ARHGEF9O43307 516 aa23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 PTHP01270 115 aa23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 LHX2P50458 406 aa23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 DAP3P51398 398 aaKnown RBP23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 AGFG1P52594 562 aaKnown RBP23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 GP2P55259 537 aaKnown RBP23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 RAC3P60763 192 aa23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 RPS7P62081 194 aaKnown RBP23.27■■□□□ 1.32
SCAMP4-210ENST00000588555 RUNX1T1Q06455 604 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms