RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 NMNAT3Q96T66 252 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 DDOQ99489 341 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 CCDC90BQ9GZT6 254 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 LDAHQ9H6V9 325 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 EXO5Q9H790 373 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 ZDHHC11Q9H8X9 412 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 MED20Q9H944 212 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 VCX3AQ9NNX9 186 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 TIGARQ9NQ88 270 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 BATF3Q9NR55 127 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 MRPS18AQ9NVS2 196 aaKnown RBP9.89□□□□□ -0.83
SKA2-206ENST00000581068 WARS2Q9UGM6 360 aaKnown RBP9.89□□□□□ -0.83
SKA2-206ENST00000581068 NPIPA1Q9UND3 350 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 SPTBN4Q9H254 2564 aa9.89□□□□□ -0.83
SKA2-206ENST00000581068 MPDZO75970 2070 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 A0A087WV48 116 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 TRGV5A0A0B4J1U4 118 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 SLC22A31A6NKX4 558 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 XKRYO14609 159 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 TFECO14948 347 aaPredicted RBP9.88□□□□□ -0.83
SKA2-206ENST00000581068 ARHGEF9O43307 516 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 CXCL13O43927 109 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 VAMP5O95183 116 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 MT-ND2P03891 347 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 ITGB2P05107 769 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 STSP08842 583 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 HTR1AP08908 422 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 C1QTNF9P0C862 333 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 HLA-DOBP13765 273 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 ZNF24P17028 368 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 ENPP1P22413 925 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 RPL5P46777 297 aaKnown RBP9.88□□□□□ -0.83
SKA2-206ENST00000581068 MTNR1AP48039 350 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 LHX2P50458 406 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 SLC25A1P53007 311 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 SUCLG1P53597 346 aaKnown RBP9.88□□□□□ -0.83
SKA2-206ENST00000581068 NR1H2P55055 460 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 RPS3AP61247 264 aaKnown RBP9.88□□□□□ -0.83
SKA2-206ENST00000581068 H3F3AP84243 136 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 PMP22Q01453 160 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 ST3GAL4Q11206 333 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 MESTQ5EB52 335 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 RPUSD3Q6P087 351 aaKnown RBP9.88□□□□□ -0.83
SKA2-206ENST00000581068 UNQ6494/PRO21346Q6UXR6 183 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 TRILQ7L0X0 811 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 ADCK1Q86TW2 530 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 UBQLNLQ8IYU4 475 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 SPARTQ8N0X7 666 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 BBS1Q8NFJ9 593 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 NEIL3Q8TAT5 605 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 ZNF519Q8TB69 540 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 SNRNP27Q8WVK2 155 aaKnown RBP9.88□□□□□ -0.83
SKA2-206ENST00000581068 SGCDQ92629 289 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 RNFT2Q96EX2 444 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 TMEM80Q96HE8 168 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 RHNO1Q9BSD3 238 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 HCAR1Q9BXC0 346 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 NMNAT2Q9BZQ4 307 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 OR51V1Q9H2C8 321 aa9.88□□□□□ -0.83
SKA2-206ENST00000581068 OR6C68A6NDL8 312 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 CCDC182A6NF36 153 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 ZNF814B7Z6K7 855 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 H0YC42 278 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 AHCYL1O43865 530 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 IGHG3P01860 377 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 PDGFAP04085 211 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 TFAP2AP05549 437 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 IFNGR1P15260 489 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 ZNF708P17019 499 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 ZNF43P17038 809 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 SLC2A5P22732 501 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 EIF1AXP47813 144 aaKnown RBP9.87□□□□□ -0.83
SKA2-206ENST00000581068 CLDN15P56746 228 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 CLDN18P56856 261 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 RPS7P62081 194 aaKnown RBP9.87□□□□□ -0.83
SKA2-206ENST00000581068 CXADRP78310 365 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 POU3F1Q03052 451 aaPredicted RBP9.87□□□□□ -0.83
SKA2-206ENST00000581068 RAB40BQ12829 278 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 PON3Q15166 354 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 SLC35D3Q5M8T2 416 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 LCN1P1Q5VSP4 162 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 VASNQ6EMK4 673 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 NHLRC1Q6VVB1 395 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 KCTD8Q6ZWB6 473 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 HDDC2Q7Z4H3 204 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
SKA2-206ENST00000581068 OR9Q1Q8NGQ5 310 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 OR10D3Q8NH80 312 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 C9orf43Q8TAL5 461 aaPredicted RBP9.87□□□□□ -0.83
SKA2-206ENST00000581068 ASB10Q8WXI3 467 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 EXTL1Q92935 676 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 CPNE4Q96A23 557 aaPredicted RBP9.87□□□□□ -0.83
SKA2-206ENST00000581068 LGALS12Q96DT0 336 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 ABHD17AQ96GS6 310 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 SIGLEC11Q96RL6 698 aa9.87□□□□□ -0.83
SKA2-206ENST00000581068 TEAD3Q99594 435 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms