RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 GUSBP08236 651 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 NPIPA8P0DM63 369 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 ATP6V1C1P21283 382 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 IGHV1-2P23083 117 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 APEX1P27695 318 aaKnown RBP9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SHC1P29353 583 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 APOBEC3AP31941 199 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-210ENST00000580713 CRYBA2P53672 197 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SELENOWP63302 87 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 RCN1Q15293 331 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 FAM98BQ52LJ0 330 aaKnown RBP9.4□□□□□ -0.9
TOP3A-210ENST00000580713 TYW3Q6IPR3 259 aaKnown RBP9.4□□□□□ -0.9
TOP3A-210ENST00000580713 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 ARMC8Q8IUR7 673 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SLC43A2Q8N370 569 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 LINC01356Q8N9X3 169 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SMYD1Q8NB12 490 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 ZNF418Q8TF45 676 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-210ENST00000580713 RASSF5Q8WWW0 418 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 PMM1Q92871 262 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SLCO4A1Q96BD0 722 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SLC47A1Q96FL8 570 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 PYURFQ96I23 114 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 TPD52L3Q96J77 140 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SORCS2Q96PQ0 1159 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SEPHS2Q99611 448 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 SAP130Q9H0E3 1048 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 MAGIXQ9H6Y5 334 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 MTHFD2LQ9H903 347 aaPredicted RBP9.4□□□□□ -0.9
TOP3A-210ENST00000580713 FKRPQ9H9S5 495 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 HHATLQ9HCP6 504 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 POLE3Q9NRF9 147 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 KLHL9Q9P2J3 617 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 MKLN1Q9UL63 735 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 AP4S1Q9Y587 144 aa9.4□□□□□ -0.9
TOP3A-210ENST00000580713 C7orf72A4D263 438 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 SERINC4A6NH21 518 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 FAM157AC9JC47 383 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 H3BNX3 289 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 TRIM77I1YAP6 450 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 FCMRO60667 390 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 MFN2O95140 757 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 BAG2O95816 211 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 IGKV1D-16P01601 117 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 RAP2AP10114 183 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 HOXB6P17509 224 aaKnown RBP9.39□□□□□ -0.91
TOP3A-210ENST00000580713 ENPP1P22413 925 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 LGALS3BPQ08380 585 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 GPR68Q15743 365 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 TMEM176BQ3YBM2 270 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF311Q5JNZ3 666 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 FKBP9P1Q75LS8 142 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 SLC46A3Q7Z3Q1 461 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 VTCN1Q7Z7D3 282 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 PEX5LQ8IYB4 626 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 UBE2J2Q8N2K1 259 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 ZNF433Q8N7K0 673 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-210ENST00000580713 FAM86B1Q8N7N1 296 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 OR52P1PQ8NH57 321 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 POC1BQ8TC44 478 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 YY1AP1Q9H869 796 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 RNPEPL1Q9HAU8 725 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 MYOZ1Q9NP98 299 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-210ENST00000580713 ARMC1Q9NVT9 282 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 BAG5Q9UL15 447 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 IFT52Q9Y366 437 aa9.39□□□□□ -0.91
TOP3A-210ENST00000580713 HEATR1Q9H583 2144 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 GJE1A6NN92 205 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 ALG1L2C9J202 215 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 OXSR1O95747 527 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 IGHV3-9P01782 118 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 DBIP07108 87 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 ANPEPP15144 967 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 HPGDP15428 266 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 COX5AP20674 150 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 CD247P20963 164 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 PCMT1P22061 227 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 RPS4Y1P22090 263 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 EDNRAP25101 427 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 CHN2P52757 468 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 SNRPD2P62316 118 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 RASGEF1BQ0VAM2 473 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 FOXF1Q12946 379 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 SCGB2A2Q13296 93 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 LARS2Q15031 903 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 DUSP7Q16829 419 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 MIDNQ504T8 468 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 IFI44LQ53G44 452 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 PRR31Q5SQ13 230 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 AP1ARQ63HQ0 302 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 HMGN2P46Q86SG4 172 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 ZAR1Q86SH2 424 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 PEG10Q86TG7 708 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 PAPD5Q8NDF8 572 aaKnown RBP9.38□□□□□ -0.91
TOP3A-210ENST00000580713 TOR1AIP2Q8NFQ8 470 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 FAM216AQ8WUB2 273 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 ZG16BQ96DA0 208 aa9.38□□□□□ -0.91
TOP3A-210ENST00000580713 QRSL1Q9H0R6 528 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms