RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 NXT1Q9UKK6 140 aaKnown RBP16.39■□□□□ 0.21
SMPD3-211ENST00000568373 PRR32B1ATL7 298 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 XKRYO14609 159 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 ARHGEF9O43307 516 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 OR2T1O43869 369 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 CSF3P09919 207 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 AHCYP23526 432 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 PSMB10P40306 273 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 TMED10P49755 219 aaKnown RBP16.39■□□□□ 0.21
SMPD3-211ENST00000568373 SCN1BQ07699 218 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 SFXN4Q6P4A7 337 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 RPS4Y2Q8TD47 263 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 FBXO4Q9UKT5 387 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 PCDHGB2Q9Y5G2 931 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 CFAP54Q96N23 3096 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 SSX4O60224 188 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 SLC19A2O60779 497 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 OR10A3P58181 314 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 RPS11P62280 158 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 ACKR1Q16570 336 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 CDC20BQ86Y33 519 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PM20D2Q8IYS1 436 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 TTYH2Q9BSA4 534 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PPP1R3EQ9H7J1 279 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 MED11Q9P086 117 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 KLHDC2Q9Y2U9 406 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 WDFY3Q8IZQ1 3526 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 TRAV1-2A0A0B4J238 106 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 A0A0G2JK05 382 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PSMD9O00233 223 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PLPP3O14495 311 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 SEC14L5O43304 696 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 GPRIN2O60269 458 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 GATBO75879 557 aaKnown RBP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PLGP00747 810 aaPredicted RBP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PTBP1P26599 531 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 THBS2P35442 1172 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 DLX5P56178 289 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 RPL27P61353 136 aaKnown RBP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 FAM69BQ5VUD6 431 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 SLC6A19Q695T7 634 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 BICRALQ6AI39 1079 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 LYPD8Q6UX82 237 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 KCTD20Q7Z5Y7 419 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 TMEM105Q8N8V8 129 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 ZNF519Q8TB69 540 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PMEPA1Q969W9 287 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 NPAS1Q99742 590 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 PDCD1LG2Q9BQ51 273 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 MRPL39Q9NYK5 338 aaKnown RBP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 KLRF1Q9NZS2 232 aa16.38■□□□□ 0.21
SMPD3-211ENST00000568373 GPN3Q9UHW5 284 aaPredicted RBP16.38■□□□□ 0.21
SMPD3-211ENST00000568373 TVP23AA6NH52 213 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 FTCDNL1E5RQL4 147 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 TRIM3O75382 744 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 ARL6IP5O75915 188 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 OR2J2O76002 312 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 OR6A2O95222 327 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 KLK3P07288 261 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 CCL4P13236 92 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 APEX1P27695 318 aaKnown RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 CD97P48960 835 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 MADCAM1Q13477 382 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 FAM199XQ6PEV8 388 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 NRARPQ7Z6K4 114 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 OR6S1Q8NH40 331 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 ZNF417Q8TAU3 575 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 ATOH1Q92858 354 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 ADAD1Q96M93 576 aaKnown RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 SNX18Q96RF0 628 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 ZNF587Q96SQ5 575 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-211ENST00000568373 TXNIPQ9H3M7 391 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 CPAMD8Q8IZJ3 1885 aa16.37■□□□□ 0.21
SMPD3-211ENST00000568373 PRSS37A4D1T9 235 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 IGHMP01871 453 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 TACSTD2P09758 323 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 UCHL1P09936 223 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 CCKBRP32239 447 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 APOBEC1P41238 236 aaKnown RBP16.36■□□□□ 0.21
SMPD3-211ENST00000568373 MC2RQ01718 297 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 ASAH1Q13510 395 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 TAB1Q15750 504 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 ARSKQ6UWY0 536 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 DTWD2Q8NBA8 298 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 SLC22A8Q8TCC7 542 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 RNF166Q96A37 237 aaPredicted RBP16.36■□□□□ 0.21
SMPD3-211ENST00000568373 MNTQ99583 582 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 WDR76Q9H967 626 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 MALT1Q9UDY8 824 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 RASD1Q9Y272 281 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 LOC102723996A0A087X1L8 192 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 M0R296 226 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 AKR7A3O95154 331 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 FBXO45P0C2W1 286 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 RAB3BP20337 219 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 RFX2P48378 723 aa16.36■□□□□ 0.21
SMPD3-211ENST00000568373 NANOS3P60323 173 aaKnown RBP16.36■□□□□ 0.21
SMPD3-211ENST00000568373 RIN1Q13671 783 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms