RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF432O94892 652 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 DNAJA1P31689 397 aaKnown RBP15.43■□□□□ 0.06
SHMT2-225ENST00000556798 LIMS1P48059 325 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 RPS4XP62701 263 aaKnown RBP15.43■□□□□ 0.06
SHMT2-225ENST00000556798 CCNIQ14094 377 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 LAPTM4AQ15012 233 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 NHLRC1Q6VVB1 395 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 TMPRSS11FQ6ZWK6 438 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 SLC35D2Q76EJ3 337 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 OAFQ86UD1 273 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 IGFN1Q86VF2 1251 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 OR4C15Q8NGM1 316 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 MARVELD3Q96A59 401 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 SLCO4A1Q96BD0 722 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 OR2M2Q96R28 347 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 REEP1Q9H902 201 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 MALT1Q9UDY8 824 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 TMCC3Q9ULS5 477 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 HIF3AQ9Y2N7 669 aa15.43■□□□□ 0.06
SHMT2-225ENST00000556798 SAMHD1Q9Y3Z3 626 aaKnown RBP15.43■□□□□ 0.06
SHMT2-225ENST00000556798 CELSR2Q9HCU4 2923 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 SLC35F4A4IF30 521 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 CLOCKO15516 846 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 SLC43A1O75387 559 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 UPK3AO75631 287 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 KRT36O76013 467 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 CNOT4O95628 575 aaKnown RBP15.42■□□□□ 0.06
SHMT2-225ENST00000556798 TSPAN19P0C672 248 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 PSMB1P20618 241 aaKnown RBP15.42■□□□□ 0.06
SHMT2-225ENST00000556798 COX5AP20674 150 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 SLC9A3P48764 834 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 BIDP55957 195 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 CAMK2DQ13557 499 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 FHL1Q13642 323 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 ALG10Q5BKT4 473 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 SFRP5Q5T4F7 317 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 LINGO2Q7L985 606 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 ZER1Q7Z7L7 766 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 TMEM123Q8N131 208 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 OR9Q2Q8NGE9 314 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 KISS1RQ969F8 398 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-225ENST00000556798 ZC3HAV1LQ96H79 300 aaKnown RBP15.42■□□□□ 0.06
SHMT2-225ENST00000556798 TNFRSF13CQ96RJ3 184 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 GPA33Q99795 319 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 ACTR6Q9GZN1 396 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 MCCC2Q9HCC0 563 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 KRCC1Q9NPI7 259 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-225ENST00000556798 INIPQ9NRY2 104 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 ASB6Q9NWX5 421 aa15.42■□□□□ 0.06
SHMT2-225ENST00000556798 DCHS2Q6V1P9 2916 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 CACNA1DQ01668 2161 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 SH3D21A4FU49 640 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 HNRNPRO43390 633 aaKnown RBP15.41■□□□□ 0.06
SHMT2-225ENST00000556798 RAD51DO75771 328 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 KRT33AO76009 404 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 CST1P01037 141 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 ITGA5P08648 1049 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 IL32P24001 234 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 PEX19P40855 299 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 PCYT1AP49585 367 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 ITGADQ13349 1161 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 TOP3AQ13472 1001 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-225ENST00000556798 P2RY6Q15077 328 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 PHYHD1Q5SRE7 291 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 C22orf34Q6ZV56 151 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 BHLHA15Q7RTS1 189 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-225ENST00000556798 POMGNT2Q8NAT1 580 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 S100PBPQ96BU1 408 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 WFIKKN1Q96NZ8 548 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 MED18Q9BUE0 208 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 CCM2LQ9NUG4 571 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-225ENST00000556798 GPR52Q9Y2T5 361 aa15.41■□□□□ 0.06
SHMT2-225ENST00000556798 SETXQ7Z333 2677 aaKnown RBP15.41■□□□□ 0.06
SHMT2-225ENST00000556798 A0A1W2PRG6 482 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 UNC119BA6NIH7 251 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 ZNF726A6NNF4 738 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 M0R3G1 203 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 PDLIM1O00151 329 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 KLF4O43474 513 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 TIPRLO75663 272 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 CCNB2O95067 398 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 ZNF26P17031 533 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-225ENST00000556798 HMGA2P52926 109 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 IST1P53990 364 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 ACKR1Q16570 336 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 ZBED5Q49AG3 693 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 PGBD2Q6P3X8 592 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 GPR137CQ8N3F9 429 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 ZNF433Q8N7K0 673 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-225ENST00000556798 LRRC75AQ8NAA5 344 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 PAPD5Q8NDF8 572 aaKnown RBP15.4■□□□□ 0.06
SHMT2-225ENST00000556798 TAS2R16Q9NYV7 291 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 NDRG3Q9UGV2 375 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 UNC79Q9P2D8 2635 aa15.4■□□□□ 0.06
SHMT2-225ENST00000556798 MCIDASD6RGH6 385 aa15.39■□□□□ 0.05
SHMT2-225ENST00000556798 ZNF587BE7ETH6 402 aa15.39■□□□□ 0.05
SHMT2-225ENST00000556798 GNGT2O14610 69 aa15.39■□□□□ 0.05
SHMT2-225ENST00000556798 BCL10O95999 233 aa15.39■□□□□ 0.05
SHMT2-225ENST00000556798 CDH2P19022 906 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-225ENST00000556798 CTXN1P60606 82 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms