RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZMAT1Q5H9K5 638 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM81Q6P7N7 255 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 DPY19L4Q7Z388 723 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CEACAM19Q7Z692 300 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 NAGSQ8N159 534 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 THAP6Q8TBB0 222 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MUL1Q969V5 352 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ISL2Q96A47 359 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ZC3H10Q96K80 434 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SAMD8Q96LT4 415 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SLC6A7Q99884 636 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 GABRG3Q99928 467 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 BEX1Q9HBH7 125 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CRLF2Q9HC73 371 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ASH2LQ9UBL3 628 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 BTNL2Q9UIR0 455 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 PPIL1Q9Y3C6 166 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 BRCA2P51587 3418 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TRAV6A0A075B6T7 132 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SLC5A10A0PJK1 596 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CLCA1A8K7I4 914 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 KDM4EB2RXH2 506 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TXNL1O43396 289 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 PIAS2O75928 621 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SLCO2B1O94956 709 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 IGHV3-9P01782 118 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SERPINA5P05154 406 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CEACAM5P06731 702 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CBR1P16152 277 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ATP1B3P54709 279 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 GNMTQ14749 295 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM200AQ86VY9 491 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 KIAA1958Q8N8K9 716 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MYNNQ9NPC7 610 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 DCAF16Q9NXF7 216 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 NDUFAF4Q9P032 175 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ENPP4Q9Y6X5 453 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ABCA1O95477 2261 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 NKX6-3A6NJ46 265 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TAPBPO15533 448 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 RBBP9O75884 186 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 GABARAPO95166 117 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MAS1P04201 325 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SLC2A2P11168 524 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 RPS5P46782 204 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MAP2K6P52564 334 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 GP2P55259 537 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CTAG1AP78358 180 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MVKQ03426 396 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CNN3Q15417 329 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CTF1Q16619 201 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 LTC4SQ16873 150 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SLC6A19Q695T7 634 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 LRRN1Q6UXK5 716 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 KMT5CQ86Y97 462 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 CHDHQ8NE62 594 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 C2CD4CQ8TF44 421 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 NTMT1Q9BV86 223 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 NELFAQ9H3P2 528 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SEMA4GQ9NTN9 838 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MED11Q9P086 117 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 FBXO4Q9UKT5 387 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 DIMT1Q9UNQ2 313 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MED16Q9Y2X0 877 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 PCM1Q15154 2024 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TVP23AA6NH52 213 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 PDGFBP01127 241 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 FABP1P07148 127 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SFTPBP07988 381 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SBK3P0C264 359 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SLC35E2P0CK97 266 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ADARB1P78563 741 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 HOXC5Q00444 222 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 GPR139Q6DWJ6 353 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MOB3CQ70IA8 216 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 MED25Q71SY5 747 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TPRA1Q86W33 373 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ADGRG5Q8IZF4 528 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF578Q96N58 590 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-218ENST00000545889 SYT3Q9BQG1 590 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 PRELID3BQ9Y3B1 194 aa7.93□□□□□ -1.14
CLIP1-218ENST00000545889 TANC1Q9C0D5 1861 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 FAM90A27PA6NNH2 459 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 INMT-MINDY4F8WBC2 141 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CASC3O15234 703 aaKnown RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 TSPAN12O95859 305 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 ST6GAL1P15907 406 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 TACR3P29371 465 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 UGT2B10P36537 528 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 RFC3P40938 356 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 GPR3P46089 330 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CAPZBP47756 277 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 PCBP4P57723 403 aaKnown RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 SSX2Q16385 188 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 RPS26P11Q5JNZ5 115 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-218ENST00000545889 METRNLQ641Q3 311 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 C5orf46Q6UWT4 87 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 CMTM1Q8IZ96 169 aa7.92□□□□□ -1.14
CLIP1-218ENST00000545889 GDPD1Q8N9F7 314 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms