RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MAMDC2Q7Z304 686 aaPredicted RBP12.32□□□□□ -0.44
HCFC2-202ENST00000544223 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 ESX1Q8N693 406 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 OR4K17Q8NGC6 315 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 TTC9Q92623 222 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 OR5B2Q96R09 309 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 NMNAT2Q9BZQ4 307 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 GALNT8Q9NY28 637 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 GNG8Q9UK08 70 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 CAB39Q9Y376 341 aaPredicted RBP12.32□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 IGHV3-15A0A0B4J1V0 119 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 A0A1W2PRG6 482 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 FTCDNL1E5RQL4 147 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 RPP14O95059 124 aaKnown RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 RPS15P62841 145 aaKnown RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 EXT1Q16394 746 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 GPAT4Q86UL3 456 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 SLC35F2Q8IXU6 374 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 OR6Q1Q8NGQ2 317 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 LIN37Q96GY3 246 aaPredicted RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 AMELYQ99218 206 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 CNN2Q99439 309 aaKnown RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 HPF1Q9NWY4 346 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 BABAM2Q9NXR7 383 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 SSR3Q9UNL2 185 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 ZZEF1O43149 2961 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 DNAJC13O75165 2243 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 IGKV1D-43A0A0B4J1Z2 117 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 OR6A2O95222 327 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 RFPL3SP0C7P2 107 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 IFNGR1P15260 489 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 DIO1P49895 249 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 MLF1P58340 268 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 IFITM3Q01628 133 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 DYNC1I2Q13409 638 aaKnown RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 INAQ16352 499 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 PLXDC2Q6UX71 529 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 SLC35D2Q76EJ3 337 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 BEST3Q8N1M1 668 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 M1APQ8TC57 530 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 LIPHQ8WWY8 451 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 THOC3Q96J01 351 aaKnown RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 GPX7Q96SL4 187 aaPredicted RBP12.31□□□□□ -0.44
HCFC2-202ENST00000544223 PDCD1LG2Q9BQ51 273 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 INIPQ9NRY2 104 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 KLHL21Q9UJP4 597 aa12.31□□□□□ -0.44
HCFC2-202ENST00000544223 CACNA1GO43497 2377 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 A6NL46 340 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 DOK2O60496 412 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 OC90Q02509 493 aaPredicted RBP12.3□□□□□ -0.44
HCFC2-202ENST00000544223 TPBGQ13641 420 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 C16orf87Q6PH81 154 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 TMEM91Q6ZNR0 172 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 DPY19L4Q7Z388 723 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 RNF138Q8WVD3 245 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
HCFC2-202ENST00000544223 POLE4Q9NR33 117 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 PLA2G3Q9NZ20 509 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 MAP1BP46821 2468 aaKnown RBP12.3□□□□□ -0.44
HCFC2-202ENST00000544223 PIEZO2Q9H5I5 2752 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 RGS5O15539 181 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 SLC16A7O60669 478 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 WNT11O96014 354 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 FTH1P19P0C7X4 201 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 CTLA4P16410 223 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 NAGAP17050 411 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 ENDOUP21128 410 aaKnown RBP12.3□□□□□ -0.44
HCFC2-202ENST00000544223 HNRNPA0Q13151 305 aaKnown RBP12.3□□□□□ -0.44
HCFC2-202ENST00000544223 SGCBQ16585 318 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF227Q86WZ6 799 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 MISPQ8IVT2 679 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 MFSD4AQ8N468 514 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 EXD3Q8N9H8 876 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 PSMF1Q92530 271 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 CDC6Q99741 560 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 KLHL13Q9P2N7 655 aa12.3□□□□□ -0.44
HCFC2-202ENST00000544223 IRGMA1A4Y4 181 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 PINLYPA6NC86 204 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 GABRPO00591 440 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 AKAP8O43823 692 aaKnown RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 CALRP27797 417 aaKnown RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 TLE3Q04726 772 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 SSPNQ14714 243 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 CSRP2Q16527 193 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms