RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-214ENST00000533209 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 NDRG3Q9UGV2 375 aa10.57□□□□□ -0.72
SSBP3-214ENST00000533209 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 DHRS12A0PJE2 317 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 SLC35F4A4IF30 521 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 EFCAB9A8MZ26 197 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 EBAG9O00559 213 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 CDC42EP2O14613 210 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 SLC43A1O75387 559 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 UPK3AO75631 287 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 SERPINI2O75830 405 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 THBDP07204 575 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 ITGA5P08648 1049 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 SAGP10523 405 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-214ENST00000533209 IFNGR1P15260 489 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 PPP3CBP16298 524 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 AQP2P41181 271 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 GPR4P46093 362 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 OMPP47874 163 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 HMGA2P52926 109 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 DAZAP2Q15038 168 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-214ENST00000533209 SLC35D2Q76EJ3 337 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 LINGO2Q7L985 606 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 BHLHA15Q7RTS1 189 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-214ENST00000533209 SPATA24Q86W54 205 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 CDK20Q8IZL9 346 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 S100PBPQ96BU1 408 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 TNFRSF13CQ96RJ3 184 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 MED18Q9BUE0 208 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 EMC6Q9BV81 110 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 CHID1Q9BWS9 393 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 INIPQ9NRY2 104 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 TMEM5Q9Y2B1 443 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 HIF3AQ9Y2N7 669 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 LYVE1Q9Y5Y7 322 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
SSBP3-214ENST00000533209 TRAV27A0A087WT01 109 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 FAM221AA4D161 298 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OR6C65A6NJZ3 312 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 KLF4O43474 513 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 AKAP8O43823 692 aaKnown RBP10.55□□□□□ -0.72
SSBP3-214ENST00000533209 KRT36O76013 467 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 F13BP05160 661 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF26P17031 533 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-214ENST00000533209 IL32P24001 234 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 MPGP29372 298 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 SSTR2P30874 369 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 DNAJA1P31689 397 aaKnown RBP10.55□□□□□ -0.72
SSBP3-214ENST00000533209 SLC9A3P48764 834 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 ERFP50548 548 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 BIDP55957 195 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 TLE4Q04727 773 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 ANKDD1AQ495B1 522 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 C9orf135Q5VTT2 229 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 CARD17Q5XLA6 110 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OR2T5Q6IEZ7 315 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OAFQ86UD1 273 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 LRRC75AQ8NAA5 344 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OR4C15Q8NGM1 316 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OR13C2Q8NGS9 318 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OR2T29Q8NH02 315 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 OR51A7Q8NH64 312 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 UTP4Q969X6 686 aaKnown RBP10.55□□□□□ -0.72
SSBP3-214ENST00000533209 FAM46AQ96IP4 442 aaKnown RBP10.55□□□□□ -0.72
SSBP3-214ENST00000533209 LRR1Q96L50 414 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 ALKBH3Q96Q83 286 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-214ENST00000533209 ALPK1Q96QP1 1244 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 GPA33Q99795 319 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 MCCC2Q9HCC0 563 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 VNN3Q9NY84 501 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 TAS2R16Q9NYV7 291 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 AURKCQ9UQB9 309 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 ALPK2Q86TB3 2170 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
SSBP3-214ENST00000533209 TACC2O95359 2948 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 APCP25054 2843 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 A6NNC1 897 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF726A6NNF4 738 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 CYSRT1A8MQ03 144 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ZNF587BE7ETH6 402 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 RPL36A-HNRNPH2H7BZ11 118 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 TNFRSF11BO00300 401 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 CLOCKO15516 846 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 SIAH2O43255 324 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 PTP4A3O75365 173 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 RAD51DO75771 328 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 KRT33AO76009 404 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 BCL10O95999 233 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 PPP1R8Q12972 351 aaKnown RBP10.54□□□□□ -0.72
SSBP3-214ENST00000533209 CAMK2DQ13557 499 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 MELKQ14680 651 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 TAB1Q15750 504 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 GABRA6Q16445 453 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ZBED5Q49AG3 693 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ALG10Q5BKT4 473 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 PHYHD1Q5SRE7 291 aa10.54□□□□□ -0.72
SSBP3-214ENST00000533209 ABHD12BQ7Z5M8 362 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms