RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 LIN7BQ9HAP6 207 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 H7C1Q1 480 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 HSPB6O14558 160 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 OLFM2O95897 454 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 OR8G3PP0DMU2 310 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 CD79BP40259 229 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 TBC1D28Q2M2D7 210 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 TIMD4Q96H15 378 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM59Q9BXS4 323 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 MED16Q9Y2X0 877 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 ADAM23O75077 832 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 PAHP00439 452 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 IL1AP01583 271 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 IGHV3-9P01782 118 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 CD14P08571 375 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 KANSL1Q7Z3B3 1105 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 RETREG3Q86VR2 466 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 OR13C9Q8NGT0 318 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 OCSTAMPQ9BR26 566 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM246Q9BRR3 403 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 EHFQ9NZC4 300 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 ANKRD12Q6UB98 2062 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 A0A1W2PPV4 95 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 LCMT2O60294 686 aaKnown RBP13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 KCNK2O95069 426 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 GABREP78334 506 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 TRMT12Q53H54 448 aaKnown RBP13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 LTC4SQ16873 150 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 OR6T1Q8NGN1 323 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 SARAFQ96BY9 339 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 TSSK2Q96PF2 358 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 NKX3-1Q99801 234 aaPredicted RBP13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 NDRG4Q9ULP0 352 aaKnown RBP13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 RPS18P62269 152 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ZMAT1Q5H9K5 638 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 PRICKLE2Q7Z3G6 844 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 KCTD12Q96CX2 325 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 DUSP22Q9NRW4 184 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 PAQR5Q9NXK6 330 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM72A0PK05 275 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 RGS11O94810 467 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 TFP02787 698 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 EPHA5P54756 1037 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 COQ10AQ96MF6 247 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 LYSMD1Q96S90 227 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 LTB4R2Q9NPC1 389 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ANKRD33BA6NCL7 494 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ARPC1BO15143 372 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 APOBEC1P41238 236 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 SMN1Q16637 294 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 SPARTQ8N0X7 666 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 GJC3Q8NFK1 279 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 OR5T1Q8NG75 326 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 MVB12AQ96EY5 273 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 DEFB127Q9H1M4 99 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 PTPRZ1P23471 2315 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 C4orf47A7E2U8 309 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 TOR1AO14656 332 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 TNFSF12O43508 249 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ST6GAL1P15907 406 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC14A1Q13336 389 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF691Q5VV52 312 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 C1orf140Q5VVS0 124 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 LPCAT3Q6P1A2 487 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 KMT5CQ86Y97 462 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 NPFFR2Q9Y5X5 522 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 CNTRLQ7Z7A1 2325 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 PMS2P1A4D2B8 440 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 NXPH2O95156 264 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 UBCP0CG48 685 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 KIR2DL3P43628 341 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 RPL34P49207 117 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 LCN10Q6JVE6 187 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 BCDIN3DQ7Z5W3 292 aaKnown RBP13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ARL11Q969Q4 196 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 MIB2Q96AX9 1013 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ZBTB8AQ96BR9 441 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 CCDC74BQ96LY2 380 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ZPBPQ9BS86 351 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 MENTQ9BUN1 341 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 ASB1Q9Y576 335 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 SNX11Q9Y5W9 270 aa13.62□□□□□ -0.23
PCDHA9-202ENST00000532602 A0A1B0GV50 99 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 PRAMEF4O60810 478 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 NFYAP23511 347 aaPredicted RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC19A1P41440 591 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 BTG2P78543 158 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 FAM71E1Q6IPT2 247 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF808Q8N4W9 903 aaPredicted RBP13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 PFN4Q8NHR9 129 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 TUBB1Q9H4B7 451 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 A0A1W2PPC4 97 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 IL2RAP01589 272 aa13.61□□□□□ -0.23
PCDHA9-202ENST00000532602 KITLGP21583 273 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms