RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 POLE4Q9NR33 117 aa1.94□□□□□ -2.1
SKP1-203ENST00000517625 ETNK2Q9NVF9 386 aa1.94□□□□□ -2.1
SKP1-203ENST00000517625 SLC25A37Q9NYZ2 338 aa1.94□□□□□ -2.1
SKP1-203ENST00000517625 ZNF639Q9UID6 485 aa1.94□□□□□ -2.1
SKP1-203ENST00000517625 ATAD2BQ9ULI0 1458 aa1.94□□□□□ -2.1
SKP1-203ENST00000517625 PPIAL4EA0A075B759 164 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 A0A0B4J2A0 478 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 RBMY1BA6NDE4 496 aaKnown RBP1.93□□□□□ -2.1
SKP1-203ENST00000517625 RBMY1EA6NEQ0 496 aaKnown RBP1.93□□□□□ -2.1
SKP1-203ENST00000517625 HAS3O00219 553 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 XKRYO14609 159 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 OR7A10O76100 309 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 NDUFB10O96000 172 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 MOSP00540 346 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 RBMY1DP0C7P1 496 aaKnown RBP1.93□□□□□ -2.1
SKP1-203ENST00000517625 ZDHHC11BP0C7U3 371 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 GKN3PP0CG01 181 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 RBMY1A1P0DJD3 496 aaKnown RBP1.93□□□□□ -2.1
SKP1-203ENST00000517625 PPIAL4FP0DN26 164 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 NPBWR2P48146 333 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 LHX2P50458 406 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 SEC61GP60059 68 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 ACVR1Q04771 509 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 TSPO2Q5TGU0 170 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 OR2A2Q6IF42 318 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 C1orf94Q6P1W5 598 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 KDELC1Q6UW63 502 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 KDM7AQ6ZMT4 941 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 SLC25A48Q6ZT89 311 aaKnown RBP1.93□□□□□ -2.1
SKP1-203ENST00000517625 ECHDC2Q86YB7 292 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 MFSD6LQ8IWD5 586 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 ZNF786Q8N393 782 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 TPRX1Q8N7U7 411 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 CCDC54Q8NEL0 328 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 OR1L4Q8NGR5 311 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 OR13C2Q8NGS9 318 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 DTX3LQ8TDB6 740 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 CD300LFQ8TDQ1 290 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 ZNF606Q8WXB4 792 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.93□□□□□ -2.1
SKP1-203ENST00000517625 ASB9Q96DX5 294 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 RNF185Q96GF1 192 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 SORT1Q99523 831 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 SH3GL3Q99963 347 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 LINC00597Q9H2U6 94 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 RNF167Q9H6Y7 350 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 HOXC10Q9NYD6 342 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 SPATA7Q9P0W8 599 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 SHPKQ9UHJ6 478 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 PRO0461Q9UI25 63 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 KLK12Q9UKR0 248 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 IKZF2Q9UKS7 526 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 NEU3Q9UQ49 428 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 CARMIL3Q8ND23 1372 aa1.93□□□□□ -2.1
SKP1-203ENST00000517625 CDHR2Q9BYE9 1310 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 TDRD6O60522 2096 aaKnown RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 IGLV11-55A0A075B6I3 123 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 A0A1B0GVL5 298 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 H0Y8G0 127 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 MAGEB4O15481 346 aaPredicted RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 RIPK2O43353 540 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 PALMO75781 387 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 ERLIN2O94905 339 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 SLC25A27O95847 323 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 IGHV2-5P01817 119 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 ALDOBP05062 364 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 CSF3P09919 207 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 ZNF853P0CG23 659 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 IGHV3-43DP0DP04 118 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 MCF2P10911 925 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 NCK1P16333 377 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 OMGP23515 440 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 GPR6P46095 362 aaPredicted RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 RPS10P46783 165 aaKnown RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 NMUP48645 174 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 SULT1E1P49888 294 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 SUB1P53999 127 aaKnown RBP eCLIP1.92□□□□□ -2.13e-16■■■■■ 72.7
SKP1-203ENST00000517625 ATP5IP56385 69 aaPredicted RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 FBXW4P57775 412 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 SMARCB1Q12824 385 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 EIF4EBP2Q13542 120 aaPredicted RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 ZMYND11Q15326 602 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 SSX2Q16385 188 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 SGCAQ16586 387 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 KRTAP13-3Q3SY46 172 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 CEP55Q53EZ4 464 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 PHYHD1Q5SRE7 291 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 LRRC31Q6UY01 552 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 TIFABQ6ZNK6 161 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 ZNF621Q6ZSS3 439 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 NBPF5PQ86XG9 351 aaPredicted RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 PSTKQ8IV42 348 aaKnown RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 NECAB1Q8N987 351 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 ZNF557Q8N988 423 aaPredicted RBP1.92□□□□□ -2.1
SKP1-203ENST00000517625 DUSP18Q8NEJ0 188 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 MARCH1Q8TCQ1 289 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 PIBF1Q8WXW3 757 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 NT5C3BQ969T7 300 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 FAM104AQ969W3 186 aa1.92□□□□□ -2.1
SKP1-203ENST00000517625 PLEKHA8Q96JA3 519 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms