RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 RBMY1BA6NDE4 496 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 RBMY1EA6NEQ0 496 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 ANKRD63C9JTQ0 380 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 ALDOBP05062 364 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 CSF3P09919 207 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 RBMY1DP0C7P1 496 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 RBMY1A1P0DJD3 496 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 IGHV3-43DP0DP04 118 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 FDFT1P37268 417 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 PRPHP41219 470 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 CXCL5P42830 114 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF136P52737 540 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 SCRN3Q0VDG4 424 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 OR4F3Q6IEY1 312 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 VSTM4Q8IW00 320 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF540Q8NDQ6 660 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 OR52H1Q8NGJ2 320 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 TMEM158Q8WZ71 300 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 CEP170P1Q96L14 293 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF641Q96N77 438 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 OXGR1Q96P68 337 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 SLC38A2Q96QD8 506 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 NPAS2Q99743 824 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 CAPS2Q9BXY5 557 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 MFFQ9GZY8 342 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 CDC42EP4Q9H3Q1 356 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 SHPKQ9UHJ6 478 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 CDH9Q9ULB4 789 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 MEMO1Q9Y316 297 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 HEBP2Q9Y5Z4 205 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 PTCH1Q13635 1447 aa1.96□□□□□ -2.1
ECHDC1-213ENST00000474240 PRSS37A4D1T9 235 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 H0YCG3 227 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 HSD17B6O14756 317 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 ANGPTL7O43827 346 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 TOM1O60784 492 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SUPT3HO75486 399 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 ERLIN2O94905 339 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 BGLAPP02818 100 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 OPN1MWP04001 364 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 C2P06681 752 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 CISD3P0C7P0 127 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 OPN1MW2P0DN77 364 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 OPN1MW3P0DN78 364 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 PCMT1P22061 227 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 CD1CP29017 333 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 RORAP35398 523 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SUB1P53999 127 aaKnown RBP eCLIP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 OGDHQ02218 1023 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 ACVR1Q04771 509 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 MRPL28Q13084 256 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 PTGES3Q15185 160 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 DEFB116Q30KQ4 102 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 ZBED5Q49AG3 693 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 C5orf47Q569G3 176 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 OR52W1Q6IF63 320 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 LYPD1Q8N2G4 141 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SLC22A8Q8TCC7 542 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 ACTRT1Q8TDG2 376 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SMARCD2Q92925 531 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 AURKBQ96GD4 344 aaPredicted RBP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 TSGA13Q96PP4 275 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SECISBP2Q96T21 854 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 CCT7Q99832 543 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SH3GL3Q99963 347 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 TMEM43Q9BTV4 400 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 OSBPL10Q9BXB5 764 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 PARP12Q9H0J9 701 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 RNF167Q9H6Y7 350 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 LY9Q9HBG7 655 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 MCCC2Q9HCC0 563 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 RAB18Q9NP72 206 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 SPATA7Q9P0W8 599 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 ADAM28Q9UKQ2 775 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 PACSIN2Q9UNF0 486 aaPredicted RBP1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 KCNIP3Q9Y2W7 256 aa1.95□□□□□ -2.1
ECHDC1-213ENST00000474240 IGHV3-66A0A0C4DH42 116 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 B4GALT5O43286 388 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 SOX15O60248 233 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 CAPN1P07384 714 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF823P16415 610 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 GPR6P46095 362 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 RPS9P46781 194 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 IFNAR2P48551 515 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 CRISP3P54108 245 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 CDK16Q00536 496 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 TCP10Q12799 353 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 IMMTQ16891 758 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 CCDC152Q4G0S7 254 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 LYPD2Q6UXB3 125 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 LRRC74BQ6ZQY2 392 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 PPP1R42Q7Z4L9 355 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 LRRC75A-AS1Q8N1F1 130 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 OR10G4Q8NGN3 311 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 OR2T3Q8NH03 318 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 SLC41A3Q96GZ6 507 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 TSSK3Q96PN8 268 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 SORT1Q99523 831 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 SPIN2AQ99865 258 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms