RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 STAC2Q6ZMT1 411 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 CDH24Q86UP0 819 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 ZNF321PQ8N8H1 164 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 LRRC75AQ8NAA5 344 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 OR6N2Q8NGY6 317 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 OR52I2Q8NH67 350 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 C1orf216Q8TAB5 229 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 LMX1AQ8TE12 382 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 PTPMT1Q8WUK0 201 aaPredicted RBP16.67■□□□□ 0.26
SYNE4-204ENST00000465425 SLC46A1Q96NT5 459 aa16.67■□□□□ 0.26
SYNE4-204ENST00000465425 MRM2Q9UI43 246 aaKnown RBP16.67■□□□□ 0.26
SYNE4-204ENST00000465425 A0A1B0GTQ1 180 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 GMFGO60234 142 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 RAB40ALP0C0E4 278 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 TACR3P29371 465 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 UQCRC1P31930 480 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 RORAP35398 523 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 SOX2P48431 317 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 CCR9P51686 369 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 EMC4Q5J8M3 183 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 APOOLQ6UXV4 268 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 GKN2Q86XP6 184 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 EID2Q8N6I1 236 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 RLN3Q8WXF3 142 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 RAB40AQ8WXH6 277 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 KTI12Q96EK9 354 aaPredicted RBP16.66■□□□□ 0.26
SYNE4-204ENST00000465425 ADOQ96SZ5 270 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 PLEKHA1Q9HB21 404 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 HRASLSQ9HDD0 168 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 KLHDC2Q9Y2U9 406 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 FKBP7Q9Y680 259 aa16.66■□□□□ 0.26
SYNE4-204ENST00000465425 IGHV5-51A0A0C4DH38 117 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 NAP1L6A6NFF2 107 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 TVP23AA6NH52 213 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 LILRA5A6NI73 299 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 DCTN6O00399 190 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 NOS1APO75052 506 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 UPK3AO75631 287 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 RENP00797 406 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 CALCBP10092 127 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 MST1P26927 711 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 MAOBP27338 520 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 LTBRP36941 435 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 GABRA4P48169 554 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 RPL6Q02878 288 aaKnown RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 FAM160A2Q8N612 972 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 EXD3Q8N9H8 876 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 GAL3ST4Q96RP7 486 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 FRRS1LQ9P0K9 344 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 A0A087WV48 116 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 TLCD2A6NGC4 264 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 SULT1B1O43704 296 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 TXNDC12O95881 172 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 PSMB1P20618 241 aaKnown RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 LTBQ06643 244 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 MESTQ5EB52 335 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 ZBTB37Q5TC79 503 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 PWWP2BQ6NUJ5 590 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 CDC20BQ86Y33 519 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 TMEM151BQ8IW70 566 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 SMRP1Q8NCR6 262 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 FAM174AQ8TBP5 190 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 RNF166Q96A37 237 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 MAP6Q96JE9 813 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 LCORQ96JN0 433 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-204ENST00000465425 GPR137Q96N19 417 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 TSPAN32Q96QS1 320 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 COMMD4Q9H0A8 199 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 KLK11Q9UBX7 282 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 OR5V1Q9UGF6 321 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 TMEM131Q92545 1883 aa16.65■□□□□ 0.26
SYNE4-204ENST00000465425 ANXA2P2A6NMY6 339 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 GMDSO60547 372 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 ANXA2P07355 339 aaKnown RBP16.64■□□□□ 0.25
SYNE4-204ENST00000465425 SULT1A3P0DMM9 295 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 SULT1A4P0DMN0 295 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 ART1P52961 327 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 MRPS10P82664 201 aaKnown RBP16.64■□□□□ 0.25
SYNE4-204ENST00000465425 TTLL10Q6ZVT0 673 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 PRR22Q8IZ63 422 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 OR6V1Q8N148 313 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 KLHL15Q96M94 604 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 WDR76Q9H967 626 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 DIABLOQ9NR28 239 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 EMC3Q9P0I2 261 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 MPDZO75970 2070 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 MEIKINA0A087WXM9 373 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 FRG2CA6NGY1 282 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 C2CD4DB7Z1M9 353 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 KHNYNO15037 678 aaKnown RBP16.64■□□□□ 0.25
SYNE4-204ENST00000465425 HCRTR2O43614 444 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 PRAF2O60831 178 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 PER3P56645 1201 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 POMZP3Q6PJE2 187 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 DPY19L4Q7Z388 723 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 TMPRSS12Q86WS5 348 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF676Q8N7Q3 588 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 OR11H4Q8NGC9 324 aa16.64■□□□□ 0.25
SYNE4-204ENST00000465425 THEM6Q8WUY1 208 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms