RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 A0A096LPE4 126 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 IGHV3-15A0A0B4J1V0 119 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 TRBV4-1A0A0J9YWV2 114 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 A0A1W2PPZ6 126 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 SH3PXD2BA1X283 911 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 EFCAB9A8MZ26 197 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 CENPBD1B2RD01 187 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 KDM4EB2RXH2 506 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 EEF1E1-BLOC1S5C9J1V9 151 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 KPNA4O00629 521 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 PLPP3O14495 311 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 GNGT2O14610 69 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 EEF1E1O43324 174 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 MRPL33O75394 65 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 DIRAS1O95057 198 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 CST1P01037 141 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 CGAP01215 116 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 TSPAN19P0C672 248 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 ADORA3P0DMS8 318 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 SAGP10523 405 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 NR2C1P13056 603 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 FPR3P25089 353 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 DNAJA1P31689 397 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 OR3A2P47893 321 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 LIMS1P48059 325 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 DAP3P51398 398 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 RPS4XP62701 263 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 SIRPAP78324 504 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 SORDQ00796 357 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 LTBQ06643 244 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 FOXF2Q12947 444 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 FAM205BPQ63HN1 556 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 RPL13AP3Q6NVV1 102 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 CREB3L2Q70SY1 520 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 GPAT4Q86UL3 456 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 P3H2Q8IVL5 708 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 UEVLDQ8IX04 471 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 TUSC5Q8IXB3 177 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 ZNF100Q8IYN0 542 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 POMGNT2Q8NAT1 580 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 RELL2Q8NC24 303 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 OR4K5Q8NGD3 323 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 PFN4Q8NHR9 129 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 DNAJC9Q8WXX5 260 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 RNASE6Q93091 150 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 UTP4Q969X6 686 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 NRBF2Q96F24 287 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 ADAD1Q96M93 576 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 MOGAT1Q96PD6 335 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 OSBPL10Q9BXB5 764 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 OR10A4Q9H209 315 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 ING1Q9UK53 422 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 SAMHD1Q9Y3Z3 626 aaKnown RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 AP4S1Q9Y587 144 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 FLVCR1Q9Y5Y0 555 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 DOPEY2Q9Y3R5 2298 aa7.73□□□□□ -1.17
COL28A1-205ENST00000453441 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 PTPN13Q12923 2485 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 A0A1W2PRG6 482 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 FAM90A27PA6NNH2 459 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 A8MXE2 369 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 ZNF814B7Z6K7 855 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 MS4A18H0YCH9 400 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 OR10H3O60404 316 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 E2F6O75461 281 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 CCNB2O95067 398 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 PPP3CBP16298 524 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 GSTM3P21266 225 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 FASP25445 335 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 UQCRC1P31930 480 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 OMPP47874 163 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 IL1RL1Q01638 556 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 CCNIQ14094 377 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 P2RY6Q15077 328 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 STK11Q15831 433 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 EXOC3L2Q2M3D2 409 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 C1orf94Q6P1W5 598 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 NCCRP1Q6ZVX7 275 aaPredicted RBP7.72□□□□□ -1.17
COL28A1-205ENST00000453441 AAED1Q7RTV5 226 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 OAFQ86UD1 273 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 EPHX4Q8IUS5 362 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 LIX1LQ8IVB5 337 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 CCDC103Q8IW40 242 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 OR4C15Q8NGM1 316 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 OR52J3Q8NH60 311 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 FNDC8Q8TC99 324 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 GNPDA2Q8TDQ7 276 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 LRR1Q96L50 414 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 BDH2Q9BUT1 245 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 HDHD5Q9BXW7 423 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 LINC00470Q9BZP3 86 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 CLEC4MQ9H2X3 399 aaPredicted RBP7.72□□□□□ -1.17
COL28A1-205ENST00000453441 INIPQ9NRY2 104 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 C20orf141Q9NUB4 165 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 B3GAT1Q9P2W7 334 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 CLEC4AQ9UMR7 237 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 MGAT4BQ9UQ53 548 aa7.72□□□□□ -1.17
COL28A1-205ENST00000453441 ICE1Q9Y2F5 2266 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms