RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 DTX4Q9Y2E6 619 aa17.39■□□□□ 0.38
SDCBP-204ENST00000447182 IGKV1D-42A0A075B6H8 117 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 A0A087WV48 116 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 GRXCR1A8MXD5 290 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 H7C417 338 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 XRCC3O43542 346 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 HIST1H2ABP04908 130 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 HOXD4P09016 255 aaPredicted RBP17.39■□□□□ 0.37
SDCBP-204ENST00000447182 OR8G3PP0DMU2 310 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 NTSR1P30989 418 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 RBMS2Q15434 407 aaKnown RBP17.39■□□□□ 0.37
SDCBP-204ENST00000447182 CSRP2Q16527 193 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 NDUFAF6Q330K2 333 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 RGS7BPQ6MZT1 257 aaPredicted RBP17.39■□□□□ 0.37
SDCBP-204ENST00000447182 HIST3H2AQ7L7L0 130 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 JAZF1Q86VZ6 243 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF595Q8IYB9 648 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 HIST1H2ACQ93077 130 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 CCDC74AQ96AQ1 378 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 Q9N2J8 555 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 MTFP1Q9UDX5 166 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 HIF3AQ9Y2N7 669 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 SLC6A5Q9Y345 797 aa17.39■□□□□ 0.37
SDCBP-204ENST00000447182 DOCK8Q8NF50 2099 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 TMEM72A0PK05 275 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 PYCARD-AS1I3L0S3 204 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 SUSD5O60279 629 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 RGS11O94810 467 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF432O94892 652 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 RPP14O95059 124 aaKnown RBP17.38■□□□□ 0.37
SDCBP-204ENST00000447182 CD14P08571 375 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 S100A11P31949 105 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 SEC61A1P61619 476 aaKnown RBP17.38■□□□□ 0.37
SDCBP-204ENST00000447182 LTBQ06643 244 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 PXDC1Q5TGL8 231 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-204ENST00000447182 LRRC75AQ8NAA5 344 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 TAS2R8Q9NYW2 309 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 OPN4Q9UHM6 478 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 KLHDC2Q9Y2U9 406 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 NUP210LQ5VU65 1888 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 TRBV5-7A0A0A0MS05 114 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 FAM171A2A8MVW0 826 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 CDK2AP1O14519 115 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 RBBP9O75884 186 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 NMBP08949 121 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 CFPP27918 469 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 ITPKBP27987 946 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 GRK6P43250 576 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 HLXQ14774 488 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-204ENST00000447182 CDC20BQ86Y33 519 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF440Q8IYI8 595 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 BADQ92934 168 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 SPACA7Q96KW9 195 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 ADAD1Q96M93 576 aaKnown RBP17.38■□□□□ 0.37
SDCBP-204ENST00000447182 GPR174Q9BXC1 333 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 STARD5Q9NSY2 213 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 LRIT1Q9P2V4 623 aa17.38■□□□□ 0.37
SDCBP-204ENST00000447182 CHD9Q3L8U1 2897 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 UBE2QL1A1L167 161 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 HRKO00198 91 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF254O75437 659 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 TMIGD3P0DMS9 266 aaPredicted RBP17.37■□□□□ 0.37
SDCBP-204ENST00000447182 CT45A8P0DMV1 189 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 CT45A9P0DMV2 189 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 VSIG10L2P0DP72 767 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 GDI1P31150 447 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 AQP2P41181 271 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 CT45A2Q5DJT8 189 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 NHLRC1Q6VVB1 395 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 TMPRSS12Q86WS5 348 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 NAXDQ8IW45 347 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 ARHGEF39Q8N4T4 335 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 OR9A4Q8NGU2 314 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 OR4C3Q8NH37 302 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 LHFPL5Q8TAF8 219 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF417Q8TAU3 575 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 KLHL15Q96M94 604 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 SCML1Q9UN30 329 aa17.37■□□□□ 0.37
SDCBP-204ENST00000447182 OR4C45A6NMZ5 311 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 TGFBR3LH3BV60 316 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 PRAMEF2O60811 474 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 TXNDC12O95881 172 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 SDHAP31040 664 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 PTGS2P35354 604 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 SOX2P48431 317 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 MAP2K6P52564 334 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF74Q16587 644 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF227Q86WZ6 799 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 SCARB1Q8WTV0 552 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 WDR89Q96FK6 387 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-204ENST00000447182 TSSK2Q96PF2 358 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 KXD1Q9BQD3 176 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 CCDC3Q9BQI4 270 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 FKRPQ9H9S5 495 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 HRASLS2Q9NWW9 162 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 COQ3Q9NZJ6 369 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 CPNE7Q9UBL6 633 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 STEAP1Q9UHE8 339 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 SESN1Q9Y6P5 492 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms