RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 IGLV3-22A0A075B6J6 115 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 A0A0G2JLM5 398 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 A0A1W2PPE3 182 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 A0A1W2PPV9 198 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 HEATR9A2RTY3 570 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 PSMB11A5LHX3 300 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF861PO60384 105 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 WBP4O75554 376 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 UPK3AO75631 287 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 TNFSF13O75888 250 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 ERLIN2O94905 339 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 TMEM50AO95807 157 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 SERPIND1P05546 499 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 MCF2P10911 925 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 NR2C1P13056 603 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 TBPP20226 339 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 HTR1EP28566 365 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 BTCP35070 178 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 ATP5C1P36542 298 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 DLX1P56177 255 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 PLP1P60201 277 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 BEX3Q00994 111 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 CKAP4Q07065 602 aaKnown RBP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 CUL2Q13617 745 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 PPP1R7Q15435 360 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 TRIM40Q6P9F5 258 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 RFLNAQ6ZTI6 216 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 CDR2LQ86X02 465 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 RALGPS2Q86X27 583 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 TMEM61Q8N0U2 210 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 DCAF4L2Q8NA75 395 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 C20orf203Q8NBC4 194 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 RASD2Q96D21 266 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF799Q96GE5 643 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 HSFY1Q96LI6 401 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 LINC00167Q96N53 147 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 OR8B4Q96RC9 309 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 SORT1Q99523 831 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 RASL11BQ9BPW5 248 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 NUP58Q9BVL2 599 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 GPR61Q9BZJ8 451 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 ROGDIQ9GZN7 287 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 NANOGQ9H9S0 305 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 SIAEQ9HAT2 523 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 LY9Q9HBG7 655 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 ADAP2Q9NPF8 381 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 PSMC3IPQ9P2W1 217 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 CHD1O14646 1710 aa2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.46□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCDC182A6NF36 153 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 C12orf77C9JDV5 145 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 GOSR2O14653 212 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 RNF13O43567 381 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 NPIPB7O75200 414 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 C1orf105O95561 183 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 CST1P01037 141 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 TROVE2P10155 538 aaKnown RBP eCLIP2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 ICAM2P13598 275 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 KITLGP21583 273 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 IFNA8P32881 189 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 HSD17B2P37059 387 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 CRYBB2P43320 205 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF133P52736 654 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 KCNJ2P63252 427 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF530Q6P9A1 599 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 CNIH2Q6PI25 160 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 TMEM107Q6UX40 140 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 THOC6Q86W42 341 aaKnown RBP2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 PIANPQ8IYJ0 282 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 OR2G2Q8NGZ5 317 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 RDH5Q92781 318 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 SMARCD2Q92925 531 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 STMN2Q93045 179 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 TM4SF19Q96DZ7 209 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 SLC35E1Q96K37 410 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 FCRL1Q96LA6 429 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 MBOAT4Q96T53 435 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 TMEM246Q9BRR3 403 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 FAIM2Q9BWQ8 316 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 TMEM59Q9BXS4 323 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 FAM192AQ9GZU8 254 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 MFFQ9GZY8 342 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 MRPL47Q9HD33 250 aaKnown RBP2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 IL26Q9NPH9 171 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 CSDC2Q9Y534 153 aaKnown RBP2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 SLC25A15Q9Y619 301 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 FANCIQ9NVI1 1328 aa2.45□□□□□ -2.02
TRAPPC13-204ENST00000438419 GAPVD1Q14C86 1478 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 TOP2BQ02880 1626 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 PANO1I0J062 215 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 PPP1R2P9O14990 202 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 LSM1O15116 133 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CT62P0C5K7 136 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CHTF8P0CG12 524 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 TOP1P11387 765 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 TCN1P20061 433 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CMA1P23946 247 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 PRDX3P30048 256 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 RORAP35398 523 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 FDFT1P37268 417 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms