RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PRR23CQ6ZRP0 262 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 KCTD20Q7Z5Y7 419 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 TPRA1Q86W33 373 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 OR11G2Q8NGC1 345 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 OR10G3Q8NGC4 313 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF417Q8TAU3 575 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 POC1BQ8TC44 478 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 THAP3Q8WTV1 239 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 PHYHIPQ92561 330 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 KCTD12Q96CX2 325 aaKnown RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF587Q96SQ5 575 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 KCNS3Q9BQ31 491 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 SOSTQ9BQB4 213 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 HDHD5Q9BXW7 423 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 STRADBQ9C0K7 418 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 OR11A1Q9GZK7 315 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 RNF32Q9H0A6 362 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 SP140LQ9H930 580 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 GALNT9Q9HCQ5 603 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 PPP4R1LQ9P1A2 415 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF346Q9UL40 294 aaKnown RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 CHCHD2Q9Y6H1 151 aaPredicted RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 PHF3Q92576 2039 aaKnown RBP8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 CACNA1CQ13936 2221 aa8.17□□□□□ -1.1
LINCMD1-201ENST00000418518 A0A087WZY1 265 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ARPC4-TTLL3A0A0A6YYG9 625 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 IGLV1-36A0A0B4J1U3 117 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 TRAV1-2A0A0B4J238 106 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 PRSS37A4D1T9 235 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 A6NIZ1 184 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CD8B2A6NJW9 211 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 LIPT2A6NK58 231 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 C4orf47A7E2U8 309 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 PRR32B1ATL7 298 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 AGRPO00253 132 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CDX4O14627 284 aaPredicted RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 TP53I11O14683 189 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 PHYHO14832 338 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CASKO14936 926 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 SEC14L5O43304 696 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 GATBO75879 557 aaKnown RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 STK17BO94768 372 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 SERPINA3P01011 423 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 OCM2P0CE71 109 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 OCMP0CE72 109 aaPredicted RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CD8BP10966 210 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ADH6P28332 368 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 PYCR1P32322 319 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 FOLR3P41439 243 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CASP3P42574 277 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 GDI2P50395 445 aaKnown RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 KNTC1P50748 2209 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 RAP1BP61224 184 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 RAP1AP62834 184 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 PPP3R1P63098 170 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 SIRPAP78324 504 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 MXD1Q05195 221 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CHAF1BQ13112 559 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 RIN1Q13671 783 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ATP1A4Q13733 1029 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ZNF79Q15937 498 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ACKR1Q16570 336 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 TRIM16LQ309B1 348 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 GLYR1Q49A26 553 aaPredicted RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 TP53I3Q53FA7 332 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 DCAF12Q5T6F0 453 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 FAM69BQ5VUD6 431 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 STEAP3Q658P3 488 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 BICRALQ6AI39 1079 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ARL9Q6T311 187 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 OPN5Q6U736 354 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 METAP1DQ6UB28 335 aaPredicted RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ARSKQ6UWY0 536 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 UNQ9370/PRO34162Q6UXP9 181 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 NHLRC1Q6VVB1 395 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 NDUFAF7Q7L592 441 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 LAX1Q8IWV1 398 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 OR6V1Q8N148 313 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 OR51L1Q8NGJ5 315 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 OR6K6Q8NGW6 343 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ABHD4Q8TB40 342 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 SLC25A43Q8WUT9 341 aaPredicted RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 THAP4Q8WY91 577 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ACOT12Q8WYK0 555 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ATOH1Q92858 354 aaPredicted RBP8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 DDIT4LQ96D03 193 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CEP19Q96LK0 163 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 TAAR9Q96RI9 348 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 NPAS1Q99742 590 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ATF6BQ99941 703 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 SRRQ9GZT4 340 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ZCCHC4Q9H5U6 513 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 METTL7AQ9H8H3 244 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 CHST11Q9NPF2 352 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 ALKBH4Q9NXW9 302 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 KLRF1Q9NZS2 232 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 MED11Q9P086 117 aa8.16□□□□□ -1.1
LINCMD1-201ENST00000418518 KLHL13Q9P2N7 655 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms