RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 COMMD4Q9H0A8 199 aa13.17□□□□□ -0.3
SREBF1-205ENST00000395757 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
SREBF1-205ENST00000395757 PI4KAP42356 2102 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 DCTN6O00399 190 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CTRB1P17538 263 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 STOMP27105 288 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ACTC1P68032 377 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ACTA1P68133 377 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ASAH1Q13510 395 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 SF3A2Q15428 464 aaKnown RBP13.16□□□□□ -0.3
SREBF1-205ENST00000395757 SCGB2B2Q4G0G5 96 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 PRAMEF8Q5VWM4 474 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 PRAMEF7Q5VXH5 474 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CTRB2Q6GPI1 263 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 OR10K2Q6IF99 312 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 FAM122CQ6P4D5 195 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 LRRC28Q86X40 367 aaPredicted RBP13.16□□□□□ -0.3
SREBF1-205ENST00000395757 OR5AK2Q8NH90 309 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 PCDHGB7Q9Y5F8 929 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ITGA10O75578 1167 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 SERPINA3P01011 423 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 MNDAP41218 407 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 IFITM2Q01629 132 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 RPL13AP3Q6NVV1 102 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 MDGA2Q7Z553 956 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 OR2I1PQ8NGU4 316 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 OR2T35Q8NGX2 323 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ZDHHC12Q96GR4 267 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 STACQ99469 402 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 NKX2-2O95096 273 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CT45A8P0DMV1 189 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CT45A9P0DMV2 189 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 GDNFP39905 211 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 TAS2R43P59537 309 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ADAM8P78325 824 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 RPL18Q07020 188 aaKnown RBP13.16□□□□□ -0.3
SREBF1-205ENST00000395757 CT45A2Q5DJT8 189 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 GPBAR1Q8TDU6 330 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ANKRD19PQ9H560 264 aa13.16□□□□□ -0.3
SREBF1-205ENST00000395757 ZNF749O43361 778 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 SIX6O95475 246 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 HRGP04196 525 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 ACAA2P42765 397 aaKnown RBP13.15□□□□□ -0.3
SREBF1-205ENST00000395757 VEGFCP49767 419 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 TAF13Q15543 124 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 APOOLQ6UXV4 268 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 OR51D1Q8NGF3 324 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 TNFAIP8L1Q8WVP5 186 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 CMKLR1Q99788 373 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 ELOVL3Q9HB03 270 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 FGF21Q9NSA1 209 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 KCNG2Q9UJ96 466 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 ZNF337Q9Y3M9 751 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 A0A0B4J293 547 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 C3orf49Q96BT1 292 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 TM4SF19Q96DZ7 209 aa13.15□□□□□ -0.3
SREBF1-205ENST00000395757 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-205ENST00000395757 H0YC42 278 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 ZFPL1O95159 310 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 ZNF823P16415 610 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 LTBRP36941 435 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 DNASE1L1P49184 302 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 GAS1P54826 345 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.317e-10■■■□□ 16.7
SREBF1-205ENST00000395757 SPOCK1Q08629 439 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 ZMYND11Q15326 602 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 OR7A5Q15622 319 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 OR52I2Q8NH67 350 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 S100A16Q96FQ6 103 aaKnown RBP13.15□□□□□ -0.31
SREBF1-205ENST00000395757 SERTAD3Q9UJW9 196 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.31
SREBF1-205ENST00000395757 A0A0A6YYJ9 748 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 B8ZZF3 427 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 AHSA1O95433 338 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 F10P00742 488 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 SLC2A1P11166 492 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 MTNR1BP49286 362 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 NRG3P56975 720 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 GALK2Q01415 458 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 PRAMEF20Q5VT98 475 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 ZNF782Q6ZMW2 699 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-205ENST00000395757 CMTM4Q8IZR5 234 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 TCTN2Q96GX1 697 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 SLC2A4RGQ9NR83 387 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 PPM1BO75688 479 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 MPZL1O95297 269 aa13.14□□□□□ -0.31
SREBF1-205ENST00000395757 TACSTD2P09758 323 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms