RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 LIN37Q96GY3 246 aaPredicted RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 ZNF587Q96SQ5 575 aaPredicted RBP13.51□□□□□ -0.25
MKS1-202ENST00000393119 CDADC1Q9BWV3 514 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 SLC6A5Q9Y345 797 aa13.51□□□□□ -0.25
MKS1-202ENST00000393119 CPAMD8Q8IZJ3 1885 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 MUC6Q6W4X9 2439 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 A0A087WV48 116 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 SLC35F4A4IF30 521 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 IDH3BO43837 385 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 SBK2P0C263 348 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 SPI1P17947 270 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 OR12D2P58182 307 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 E2F1Q01094 437 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 OR7A5Q15622 319 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 VASNQ6EMK4 673 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 GID4Q8IVV7 300 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 PARP16Q8N5Y8 322 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 RNF138Q8WVD3 245 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 ARHGAP9Q9BRR9 750 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 ALG8Q9BVK2 526 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 TMED9Q9BVK6 235 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 P4HTMQ9NXG6 502 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 QPCTLQ9NXS2 382 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 ING1Q9UK53 422 aaPredicted RBP13.5□□□□□ -0.25
MKS1-202ENST00000393119 COPS3Q9UNS2 423 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 A0A1W2PNR3 127 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 TVP23AA6NH52 213 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 PRR32B1ATL7 298 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 ALX3O95076 343 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 CD14P08571 375 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 TSPAN19P0C672 248 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 CLEC2LP0C7M8 214 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 CELP19835 753 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 HTR3AP46098 478 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 MLLT11Q13015 90 aaPredicted RBP13.5□□□□□ -0.25
MKS1-202ENST00000393119 ATAD3CQ5T2N8 411 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 STPG1Q5TH74 334 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 C22orf42Q6IC83 251 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 ZNF322Q6U7Q0 402 aaPredicted RBP13.5□□□□□ -0.25
MKS1-202ENST00000393119 CELF2-AS1Q8N7Q2 184 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 TTC9Q92623 222 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 HDHD5Q9BXW7 423 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 CCDC59Q9P031 241 aaKnown RBP13.5□□□□□ -0.25
MKS1-202ENST00000393119 ZMIZ1Q9ULJ6 1067 aa13.5□□□□□ -0.25
MKS1-202ENST00000393119 FRYQ5TBA9 3013 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 CCDC187A0A096LP49 1063 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 DAPL1A0PJW8 107 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 A8MVM7 634 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 ARHGEF9O43307 516 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 RNF13O43567 381 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 CCNKO75909 580 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 HIST1H2ABP04908 130 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 TFPIP10646 304 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 PSKH1P11801 424 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 PRPS1P60891 318 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 SRSF6Q13247 344 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 C1DQ13901 141 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 ETFDHQ16134 617 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 CSRP2Q16527 193 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 TP53I3Q53FA7 332 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 RNLSQ5VYX0 342 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 HIST3H2AQ7L7L0 130 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 TMEM156Q8N614 296 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 ACBD7Q8N6N7 88 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 M1APQ8TC57 530 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 LIPHQ8WWY8 451 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 OIT3Q8WWZ8 545 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 ASB15Q8WXK1 588 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 HIST1H2ACQ93077 130 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 SDHCQ99643 169 aaPredicted RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 CDC6Q99741 560 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 EXOSC1Q9Y3B2 195 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 SF3B6Q9Y3B4 125 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 TMEM129A0AVI4 362 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 J3QLW9 94 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 IFNGP01579 166 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 ZNF19P17023 458 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 NAGAP17050 411 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 RPS19P39019 145 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 CAV3P56539 151 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 GPR85P60893 370 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 FABP5Q01469 135 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 KRR1Q13601 381 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 EXT1Q16394 746 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 PLPPR5Q32ZL2 321 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 FAM69AQ5T7M9 428 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 RSBN1Q5VWQ0 802 aaPredicted RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 PIP4P1Q86T03 277 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 PM20D2Q8IYS1 436 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 UBQLNLQ8IYU4 475 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 OR6V1Q8N148 313 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 ASCC1Q8N9N2 400 aaKnown RBP13.49□□□□□ -0.25
MKS1-202ENST00000393119 OR5J2Q8NH18 312 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 C1GALT1C1Q96EU7 318 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 SMAD5Q99717 465 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms