RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PCED1AQ9H1Q7 454 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 MYO16Q9Y6X6 1858 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 ADAM23O75077 832 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 ZGLP1P0C6A0 271 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 CD1EP15812 388 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 RPL27P61353 136 aaKnown RBP15.22■□□□□ 0.03
SCN3B-202ENST00000392770 TGFBR3Q03167 851 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 WDR34Q96EX3 536 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 HCAR1Q9BXC0 346 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 ZNF226Q9NYT6 803 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 KCNE3Q9Y6H6 103 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 OR2W5A6NFC9 320 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 Q499Y3 187 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 CCDC58Q4VC31 144 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 SFXN4Q6P4A7 337 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 SIRT6Q8N6T7 355 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 HOXB9P17482 250 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-202ENST00000392770 WNT3P56703 355 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 KCNN3Q9UGI6 736 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 LOXL2Q9Y4K0 774 aa15.22■□□□□ 0.03
SCN3B-202ENST00000392770 IGHV1OR15-9A0A0B4J2B8 117 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 ARRDC5A6NEK1 342 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 FRG2CA6NGY1 282 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 MEN1O00255 615 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 CNOT4O95628 575 aaKnown RBP15.21■□□□□ 0.03
SCN3B-202ENST00000392770 CLDN12P56749 244 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 ADPRMQ3LIE5 342 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 FAHD1Q6P587 224 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 RPS19BP1Q86WX3 136 aaKnown RBP15.21■□□□□ 0.03
SCN3B-202ENST00000392770 GPBAR1Q8TDU6 330 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 B3GALT1Q9Y5Z6 326 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 MYO9BQ13459 2157 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 KNG1P01042 644 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 DLSTP36957 453 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 HACD4Q5VWC8 232 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 AMER3Q8N944 861 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 FAM83FQ8NEG4 500 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-202ENST00000392770 OR5L1Q8NGL2 311 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 PHB2Q99623 299 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 PIAS2O75928 621 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 IFNGR1P15260 489 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 MEP1BQ16820 701 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 METTL11BQ5VVY1 283 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 KDM8Q8N371 416 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 TEAD3Q99594 435 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 TMEM246Q9BRR3 403 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 REV1Q9UBZ9 1251 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 CHRNA9Q9UGM1 479 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 MUTYHQ9UIF7 546 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 P2RY10O00398 339 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 CELA2BP08218 269 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-202ENST00000392770 SLC35A2P78381 396 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 GLYR1Q49A26 553 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-202ENST00000392770 RAB11FIP2Q7L804 512 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 TRAPPC6BQ86SZ2 158 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 PRR18Q8N4B5 295 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 NOX4Q9NPH5 578 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 SH3BGRL2Q9UJC5 107 aa15.21■□□□□ 0.03
SCN3B-202ENST00000392770 A0A1B0GVG6 124 aa15.21■□□□□ 0.02
SCN3B-202ENST00000392770 RAB40ALP0C0E4 278 aa15.21■□□□□ 0.02
SCN3B-202ENST00000392770 GPNMBQ14956 572 aa15.21■□□□□ 0.02
SCN3B-202ENST00000392770 PPA1Q15181 289 aa15.21■□□□□ 0.02
SCN3B-202ENST00000392770 LRRC69Q6ZNQ3 347 aa15.21■□□□□ 0.02
SCN3B-202ENST00000392770 RAB40AQ8WXH6 277 aa15.21■□□□□ 0.02
SCN3B-202ENST00000392770 COA3Q9Y2R0 106 aaPredicted RBP15.21■□□□□ 0.02
SCN3B-202ENST00000392770 M0R082 166 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 HIST1H1CP16403 213 aaKnown RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 FCRL6Q6DN72 434 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 COX15Q7KZN9 410 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 CLDN22Q8N7P3 220 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 LGALS14Q8TCE9 139 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 DPCDQ9BVM2 203 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 SEMA4CQ9C0C4 833 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 CLEC2LP0C7M8 214 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 ATP1B3P54709 279 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 YIF1BQ5BJH7 314 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 C7orf50Q9BRJ6 194 aaKnown RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 F5H0A9 414 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 DBHP09172 617 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 GIFP27352 417 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 HCCSP53701 268 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 GABREP78334 506 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 DCXRQ7Z4W1 244 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 TMEM99Q8N816 258 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 GAB3Q8WWW8 586 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 HSD17B8Q92506 261 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 TOMM40LQ969M1 308 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 RDH8Q9NYR8 311 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 HOXB3P14651 431 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 HNRNPFP52597 415 aaKnown RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 IHHQ14623 411 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 NKG7Q16617 165 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 KLHDC8BQ8IXV7 354 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 FAM26EQ8N5C1 309 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 IL17RDQ8NFM7 739 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 TRDV1A0A1B0GX56 115 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 OTOL1A6NHN0 477 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-202ENST00000392770 KLRC4-KLRK1H3BQV0 150 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 CTSVO60911 334 aa15.2■□□□□ 0.02
SCN3B-202ENST00000392770 S100A9P06702 114 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms