RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 STX8Q9UNK0 236 aa-0.34□□□□□ -2.46
RNU6-239P-201ENST00000390990 CCDC88CQ9P219 2028 aa-0.35□□□□□ -2.46
RNU6-239P-201ENST00000390990 ZBED9Q6R2W3 1325 aa-0.35□□□□□ -2.46
RNU6-239P-201ENST00000390990 CENPVL3A0A0U1RRI6 287 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 RNF222A6NCQ9 220 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 DDX39AO00148 427 aaKnown RBP-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 KMOO15229 486 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 STX7O15400 261 aaKnown RBP-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 CNMDO75829 334 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 IGKV1-39P01597 117 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 IGKV1D-39P04432 117 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 APOA4P06727 396 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 FGF9P31371 208 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 CASP2P42575 452 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 NME5P56597 212 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 SRP54P61011 504 aaKnown RBP-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 PPIL2Q13356 520 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 TRIM16LQ309B1 348 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 OR2A2Q6IF42 318 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 FAM159AQ6UWV7 190 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 DLEU7Q6UYE1 221 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF493Q6ZR52 646 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 TPRA1Q86W33 373 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 AKR1E2Q96JD6 320 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 RNF145Q96MT1 663 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF681Q96N22 645 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 TBL1YQ9BQ87 522 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 EDEM3Q9BZQ6 932 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 ACTR6Q9GZN1 396 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 RHBGQ9H310 441 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 RHOJQ9H4E5 214 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 COPS7BQ9H9Q2 264 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 LPAR2Q9HBW0 351 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 ISYNA1Q9NPH2 558 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 SPATA7Q9P0W8 599 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 CFDP1Q9UEE9 299 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 FBXW2Q9UKT8 454 aa-0.35□□□□□ -2.47
RNU6-239P-201ENST00000390990 CCER2I3L3R5 266 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 HIP1O00291 1037 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF73O43830 326 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 UGT1A9O60656 530 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 DKC1O60832 514 aaKnown RBP eCLIP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 P0DMU3 169 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 FAM231AP0DMU4 169 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 FAM231CP0DMU5 169 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 TCF7P36402 384 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 DAP3P51398 398 aaKnown RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 PDIA2Q13087 525 aaKnown RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 OR2G6Q5TZ20 316 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 FAM222AQ5U5X8 452 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 DNAJC24Q6P3W2 148 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 TCF24Q7RTU0 167 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZNF546Q86UE3 836 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 IQCA1Q86XH1 822 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 SGPP2Q8IWX5 399 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 ZADH2Q8N4Q0 377 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 MREGQ8N565 214 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 SLC35G3Q8N808 338 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 MUC7Q8TAX7 377 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 PNPT1Q8TCS8 783 aaKnown RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 GEMIN6Q8WXD5 167 aaKnown RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 MRPS31Q92665 395 aaKnown RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 BAG1Q99933 345 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 FTHL17Q9BXU8 183 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 RAB17Q9H0T7 212 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 UGT1A7Q9HAW7 530 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 UGT1A10Q9HAW8 530 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 UGT1A8Q9HAW9 530 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 NUDT15Q9NV35 164 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 ENOPH1Q9UHY7 261 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 AP4B1Q9Y6B7 739 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 MYO9BQ13459 2157 aa-0.36□□□□□ -2.47
RNU6-239P-201ENST00000390990 MEGF8Q7Z7M0 2845 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 H0YJW9 148 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 RASGRF2O14827 1237 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 B3GAT3O94766 335 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 CA1P00915 261 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 HLA-DPB1P04440 258 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 IGF1P05019 195 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 LGALS2P05162 132 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 POLR2EP19388 210 aaKnown RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 TBXA2RP21731 343 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 PRDX2P32119 198 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 CYLC1P35663 651 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 NUMBP49757 651 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 HNRNPFP52597 415 aaKnown RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 STX1BP61266 288 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 RPS21P63220 83 aaKnown RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 PPP1R8Q12972 351 aaKnown RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 AQP6Q13520 282 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 TSTA3Q13630 321 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 PON3Q15166 354 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 TYSND1Q2T9J0 566 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 PHYHD1Q5SRE7 291 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 AFTPHQ6ULP2 937 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 CATSPER1Q8NEC5 780 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 NOXO1Q8NFA2 376 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 VN1R2Q8NFZ6 395 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 BLNKQ8WV28 456 aa-0.37□□□□□ -2.47
RNU6-239P-201ENST00000390990 FGF14Q92915 247 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms