RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SYNPRQ8TBG9 265 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 HMGB4Q8WW32 186 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 KLHL15Q96M94 604 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 SLC46A1Q96NT5 459 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 CHRNA10Q9GZZ6 450 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 FKBP7Q9Y680 259 aa13.01□□□□□ -0.33
CD48-201ENST00000368045 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
CD48-201ENST00000368045 TRBV5-7A0A0A0MS05 114 aa13□□□□□ -0.33
CD48-201ENST00000368045 A0A1W2PQ72 361 aa13□□□□□ -0.33
CD48-201ENST00000368045 LILRA5A6NI73 299 aa13□□□□□ -0.33
CD48-201ENST00000368045 TMEM212A6NML5 194 aa13□□□□□ -0.33
CD48-201ENST00000368045 B4DGG1 531 aa13□□□□□ -0.33
CD48-201ENST00000368045 ZNF264O43296 627 aa13□□□□□ -0.33
CD48-201ENST00000368045 GMDSO60547 372 aa13□□□□□ -0.33
CD48-201ENST00000368045 ZNF254O75437 659 aa13□□□□□ -0.33
CD48-201ENST00000368045 RENP00797 406 aa13□□□□□ -0.33
CD48-201ENST00000368045 IL5P05113 134 aa13□□□□□ -0.33
CD48-201ENST00000368045 OR8G3PP0DMU2 310 aa13□□□□□ -0.33
CD48-201ENST00000368045 CPN1P15169 458 aa13□□□□□ -0.33
CD48-201ENST00000368045 CFPP27918 469 aa13□□□□□ -0.33
CD48-201ENST00000368045 GABRA4P48169 554 aa13□□□□□ -0.33
CD48-201ENST00000368045 MECP2P51608 486 aaKnown RBP13□□□□□ -0.33
CD48-201ENST00000368045 ZP1P60852 638 aa13□□□□□ -0.33
CD48-201ENST00000368045 ERV3-1Q14264 604 aa13□□□□□ -0.33
CD48-201ENST00000368045 LRRTM1Q86UE6 522 aa13□□□□□ -0.33
CD48-201ENST00000368045 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
CD48-201ENST00000368045 BMPERQ8N8U9 685 aa13□□□□□ -0.33
CD48-201ENST00000368045 ZNF511Q8NB15 262 aa13□□□□□ -0.33
CD48-201ENST00000368045 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
CD48-201ENST00000368045 PHOSPHO1Q8TCT1 267 aa13□□□□□ -0.33
CD48-201ENST00000368045 CCDC74AQ96AQ1 378 aa13□□□□□ -0.33
CD48-201ENST00000368045 MMABQ96EY8 250 aaPredicted RBP13□□□□□ -0.33
CD48-201ENST00000368045 LAT2Q9GZY6 243 aa13□□□□□ -0.33
CD48-201ENST00000368045 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
CD48-201ENST00000368045 WDR76Q9H967 626 aa13□□□□□ -0.33
CD48-201ENST00000368045 FKRPQ9H9S5 495 aa13□□□□□ -0.33
CD48-201ENST00000368045 GRHPRQ9UBQ7 328 aa13□□□□□ -0.33
CD48-201ENST00000368045 MSRAQ9UJ68 235 aa13□□□□□ -0.33
CD48-201ENST00000368045 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
CD48-201ENST00000368045 CACNA1IQ9P0X4 2223 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 UTS2O95399 124 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 HPXP02790 462 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 HIST1H2ABP04908 130 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 PROS1P07225 676 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 GRPRP30550 384 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 FASLGP48023 281 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 P2RX1P51575 399 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 AP2S1P53680 142 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 ARPC4P59998 168 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 RASGEF1BQ0VAM2 473 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 C1orf61Q13536 156 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 CD226Q15762 336 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 HIST3H2AQ7L7L0 130 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 CCDC28AQ8IWP9 274 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 SDR16C5Q8N3Y7 309 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 C7orf57Q8NEG2 295 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 HIST1H2ACQ93077 130 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 MOGAT1Q96PD6 335 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 LPAR4Q99677 370 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 MAP3K3Q99759 626 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 ADAM19Q9H013 955 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 COMMD4Q9H0A8 199 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 TAS2R5Q9NYW4 299 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 FRRS1LQ9P0K9 344 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 LAMP5Q9UJQ1 280 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 MMACHCQ9Y4U1 282 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 F5P12259 2224 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 ARHGEF17Q96PE2 2063 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 FRG2CA6NGY1 282 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 OR4C45A6NMZ5 311 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 FAM171A2A8MVW0 826 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 SNRPGP15A8MWD9 76 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 C17orf105B2RV13 164 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 CHURC1-FNTBB4DL54 471 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 OIP5O43482 229 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 SERPINI2O75830 405 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 CDK2P24941 298 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 FAUP35544 74 aaKnown RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 FNTBP49356 437 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 TAS2R20P59543 309 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 RPL18Q07020 188 aaKnown RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 GRM7Q14831 915 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 RAB30Q15771 203 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 LGALSLQ3ZCW2 172 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 EEF1A1P5Q5VTE0 462 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 MTFR2Q6P444 385 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 GLDNQ6ZMI3 551 aaPredicted RBP12.99□□□□□ -0.33
CD48-201ENST00000368045 NLRC3Q7RTR2 1065 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 BEST4Q8NFU0 473 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 GPR148Q8TDV2 347 aa12.99□□□□□ -0.33
CD48-201ENST00000368045 KLHDC7BQ96G42 594 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms