RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 GYPBP06028 91 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 PRKAR1AP10644 381 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 MAP2K6P52564 334 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 RPL18Q07020 188 aaKnown RBP13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 MFSD13AQ14CX5 517 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 EXT1Q16394 746 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 TRIM16LQ309B1 348 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 FAM69AQ5T7M9 428 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 FAM122BQ7Z309 247 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 RAB43Q86YS6 212 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 EGFL6Q8IUX8 553 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 ZFP41Q8N8Y5 198 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 HAVCR2Q8TDQ0 301 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 PPP1R14BQ96C90 147 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 RASD2Q96D21 266 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 ZMYND19Q96E35 227 aaPredicted RBP13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 TM9SF2Q99805 663 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 SLC30A2Q9BRI3 323 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 ISG20L2Q9H9L3 353 aaKnown RBP13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 MYOTQ9UBF9 498 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 DAPK2Q9UIK4 370 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 UGT2A1Q9Y4X1 527 aa13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 URB1O60287 2271 aaKnown RBP13.73□□□□□ -0.21
TUBB4B-201ENST00000340384 CASKO14936 926 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 RGS5O15539 181 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 PLPP2O43688 288 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 GMFGO60234 142 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 ZNF354AO60765 605 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 PFDN1O60925 122 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 UPK1BO75841 260 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 OR6A2O95222 327 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 SERPINA3P01011 423 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 APOBEC1P41238 236 aaKnown RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 GBX2P52951 348 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 FBXW4P57775 412 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 ZNF85Q03923 595 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 KRR1Q13601 381 aaKnown RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 SGCBQ16585 318 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 BTBD16Q32M84 506 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 DCAF10Q5QP82 559 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 C16orf47Q6ZP98 133 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 DCDC5Q6ZRR9 648 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 VASH1Q7L8A9 365 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 CCDC190Q86UF4 302 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 CENPSQ8N2Z9 138 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 ARIH2OSQ8N7S6 290 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 OR2T4Q8NH00 348 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 OR5J2Q8NH18 312 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 M1APQ8TC57 530 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 RNF138Q8WVD3 245 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 PSMF1Q92530 271 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 C4orf36Q96KX1 117 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 Q96M85 177 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 WDFY2Q96P53 400 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 DDOQ99489 341 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 MNTQ99583 582 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 CCDC32Q9BV29 185 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 RERGLQ9H628 205 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 FAIMQ9NVQ4 179 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 KLRF1Q9NZS2 232 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 YARS2Q9Y2Z4 477 aaKnown RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 ANKRD11Q6UB99 2663 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 A0A1W2PQL4 384 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 OR6C68A6NDL8 312 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 FAM47E-STBD1D6RA91 191 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 J3QLW9 94 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 SNX4O95219 450 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 ZNF19P17023 458 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 SDC2P34741 201 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 CENPAP49450 140 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 DLX5P56178 289 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 LTBQ06643 244 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 CDC20Q12834 499 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 HNRNPA0Q13151 305 aaKnown RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 TOMM34Q15785 309 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 GXYLT1Q4G148 440 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 C1orf140Q5VVS0 124 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 POMZP3Q6PJE2 187 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 PAMR1Q6UXH9 720 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 MS4A15Q8N5U1 240 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 PARP16Q8N5Y8 322 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 OR6K6Q8NGW6 343 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 NEIL3Q8TAT5 605 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 THAP3Q8WTV1 239 aaPredicted RBP13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 SNX33Q8WV41 574 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 SNX18Q96RF0 628 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 MROQ9BYG7 248 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 PPP4R1LQ9P1A2 415 aa13.72□□□□□ -0.21
TUBB4B-201ENST00000340384 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 TMEM72A0PK05 275 aa13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 ZNF891A8MT65 544 aaPredicted RBP13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 XKRYO14609 159 aa13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 TP53I11O14683 189 aa13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 NPIPB7O75200 414 aa13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 FBXO45P0C2W1 286 aa13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 ZNF41P51814 821 aaPredicted RBP13.71□□□□□ -0.22
TUBB4B-201ENST00000340384 MXD1Q05195 221 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms