RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MRGPREQ86SM8 312 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CISD2Q8N5K1 135 aaKnown RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CLDN22Q8N7P3 220 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SYT14Q8NB59 555 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 C16orf52Q8NHV5 167 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SLC38A5Q8WUX1 472 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 PIGCQ92535 297 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 RAB1CQ92928 201 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SNAPC3Q92966 411 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 ALG8Q9BVK2 526 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CDX4O14627 284 aaPredicted RBP12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF44P15621 663 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF182P17025 639 aaPredicted RBP12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 LCN6P62502 163 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 SRPXP78539 464 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 Q8IYB0 196 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 SDF2Q99470 211 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 PLEKHJ1Q9NW61 149 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 CLEC4AQ9UMR7 237 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 RAB3BP20337 219 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 WNT4P56705 351 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 CLVS2Q5SYC1 327 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM215Q68D42 235 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 TSLPQ969D9 159 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 CXorf36Q9H7Y0 433 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 CBFA2T3O75081 653 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 GPX2P18283 190 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 TPBGQ13641 420 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF750Q32MQ0 723 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 CCNJQ5T5M9 372 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 BHLHA9Q7RTU4 235 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM200AQ86VY9 491 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 IQCF2Q8IXL9 164 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 RELTQ969Z4 430 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 NPIPA5A0A0B4J1W7 369 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 DCDC2BA2VCK2 349 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 KRBA1A5PL33 1030 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 NPIPA7E9PJI5 369 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 NPIPA8P0DM63 369 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 CAPN3P20807 821 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 C19orf57Q0VDD7 668 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 C1orf185Q5T7R7 199 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 SAP130Q9H0E3 1048 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 SERGEFQ9UGK8 458 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 DUSP13Q9UII6 198 aa12.29□□□□□ -0.44
PRPF38A-201ENST00000257181 GABRR1P24046 479 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 PIN1Q13526 163 aaPredicted RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 XKR7Q5GH72 579 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 DCAF10Q5QP82 559 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 PRSS48Q7RTY5 328 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 LACC1Q8IV20 430 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 CPOQ8IVL8 374 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 MAELQ96JY0 434 aaKnown RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 WBP4O75554 376 aaKnown RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 APOA2P02652 100 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 SOX2P48431 317 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 AKR1E2Q96JD6 320 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 EBF2Q9HAK2 575 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 PPP1R14DQ9NXH3 145 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 IGHV5-51A0A0C4DH38 117 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 CRTAPO75718 401 aaPredicted RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 TOMM34Q15785 309 aaPredicted RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 UGT8Q16880 541 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 C6orf183Q5T699 404 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 BTNL3Q6UXE8 466 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 HAS2Q92819 552 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 FKBP14Q9NWM8 211 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 EPOPA6NHQ4 379 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 NXPH2O95156 264 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 SRSF5Q13243 272 aaKnown RBP12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 FAM57BQ71RH2 274 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM43Q9BTV4 400 aa12.28□□□□□ -0.44
PRPF38A-201ENST00000257181 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 ACOD1A6NK06 481 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 CDRT1O95170 752 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 IFNA1P01562 189 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 ACP2P11117 423 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 ACHEP22303 614 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 FGL1Q08830 312 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 KCNAB2Q13303 367 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 SCGB2B2Q4G0G5 96 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 NXNL2Q5VZ03 156 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 PIWIL3Q7Z3Z3 882 aaKnown RBP12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 C8orf44Q96CB5 159 aa12.27□□□□□ -0.44
PRPF38A-201ENST00000257181 C7orf50Q9BRJ6 194 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms