RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MTORP42345 2549 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 MS4A18H0YCH9 400 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 TRAF3IP2O43734 574 aaPredicted RBP19.6■□□□□ 0.73
SF1-220ENST00000626028 RBM34P42696 430 aaKnown RBP19.6■□□□□ 0.73
SF1-220ENST00000626028 FOXG1P55316 489 aaPredicted RBP19.6■□□□□ 0.73
SF1-220ENST00000626028 PMS2P3Q13401 168 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 MS4A18Q3C1V0 323 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 C8orf82Q6P1X6 216 aaPredicted RBP19.6■□□□□ 0.73
SF1-220ENST00000626028 SLC15A3Q8IY34 581 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 DEPDC4Q8N2C3 294 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 KDM8Q8N371 416 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 WDR31Q8NA23 367 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 OR5J2Q8NH18 312 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 LZICQ8WZA0 190 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 LRR1Q96L50 414 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 MOGAT1Q96PD6 335 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 MYLK2Q9H1R3 596 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 FKRPQ9H9S5 495 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 SEC14L4Q9UDX3 406 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 SLC7A7Q9UM01 511 aa19.6■□□□□ 0.73
SF1-220ENST00000626028 HTR3EA5X5Y0 456 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 GMNCA6NCL1 334 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 ABCD4O14678 606 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 SNX3O60493 162 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 LYPD3O95274 346 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 DANCRP0C864 163 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 CD40P25942 277 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 PRDX6P30041 224 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 LSP1P33241 339 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 RPS4XP62701 263 aaKnown RBP19.59■□□□□ 0.73
SF1-220ENST00000626028 SELENOWP63302 87 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 LTBQ06643 244 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 C3orf36Q3SXR2 165 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 HMBOX1Q6NT76 420 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 ANKRD16Q6P6B7 361 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 CPLX4Q7Z7G2 160 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 CARM1Q86X55 608 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 RBM45Q8IUH3 476 aaKnown RBP19.59■□□□□ 0.73
SF1-220ENST00000626028 C10orf53Q8N6V4 93 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 OR1K1Q8NGR3 316 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 SMAP2Q8WU79 429 aaPredicted RBP19.59■□□□□ 0.73
SF1-220ENST00000626028 CMTM6Q9NX76 183 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 ZNF229Q9UJW7 825 aa19.59■□□□□ 0.73
SF1-220ENST00000626028 ARPC4-TTLL3A0A0A6YYG9 625 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 SHISA9B4DS77 424 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 PLPP3O14495 311 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 OR5F1O95221 314 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 THY1P04216 161 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 SEC24CP53992 1094 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 ZP4Q12836 540 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 FOXD4Q12950 439 aaPredicted RBP19.58■□□□□ 0.72
SF1-220ENST00000626028 ZNF74Q16587 644 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 CYBRD1Q53TN4 286 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 C9orf135Q5VTT2 229 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 WDR88Q6ZMY6 472 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 LSRQ86X29 649 aaPredicted RBP19.58■□□□□ 0.72
SF1-220ENST00000626028 KRTAP1-3Q8IUG1 177 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 TMEM123Q8N131 208 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 GPR137CQ8N3F9 429 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 FAM169BQ8N8A8 192 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 KBTBD8Q8NFY9 601 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 ALKBH3Q96Q83 286 aaPredicted RBP19.58■□□□□ 0.72
SF1-220ENST00000626028 OR2M2Q96R28 347 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 NANSQ9NR45 359 aa19.58■□□□□ 0.72
SF1-220ENST00000626028 CISD1Q9NZ45 108 aaKnown RBP19.58■□□□□ 0.72
SF1-220ENST00000626028 OVOL3O00110 214 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 UPK3AO75631 287 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 PTH2RP49190 550 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 ZNF83P51522 516 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 TAS2R41P59536 307 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 IL1RL1Q01638 556 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 ROR2Q01974 943 aaKnown RBP19.57■□□□□ 0.72
SF1-220ENST00000626028 NHLRC1Q6VVB1 395 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 TREML1Q86YW5 311 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 CCDC36Q8IYA8 594 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 WFDC11Q8NEX6 87 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 BCL2L2Q92843 193 aaPredicted RBP19.57■□□□□ 0.72
SF1-220ENST00000626028 HS6ST2Q96MM7 605 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 ALG2Q9H553 416 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 DLL4Q9NR61 685 aa19.57■□□□□ 0.72
SF1-220ENST00000626028 OR6A2O95222 327 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 HIST1H2ABP04908 130 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 DRD4P21917 467 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 IFNA8P32881 189 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 POU3F1Q03052 451 aaPredicted RBP19.56■□□□□ 0.72
SF1-220ENST00000626028 LIPEQ05469 1076 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 ETFDHQ16134 617 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 TBRG1Q3YBR2 411 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 LRRC23Q53EV4 343 aaPredicted RBP19.56■□□□□ 0.72
SF1-220ENST00000626028 Q5PR19 223 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 HIST3H2AQ7L7L0 130 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 LINGO2Q7L985 606 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 DTX2Q86UW9 622 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 TSPYL5Q86VY4 417 aaPredicted RBP19.56■□□□□ 0.72
SF1-220ENST00000626028 HIST1H2ACQ93077 130 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 ADAD1Q96M93 576 aaKnown RBP19.56■□□□□ 0.72
SF1-220ENST00000626028 PRSS27Q9BQR3 290 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 B3GAT2Q9NPZ5 323 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 RIMS3Q9UJD0 308 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 USP22Q9UPT9 525 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms