RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 AKAP1Q92667 903 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC00963-217ENST00000624009 RCN3Q96D15 328 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 MYLK2Q9H1R3 596 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 FKRPQ9H9S5 495 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 DLL4Q9NR61 685 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 NPAP1Q9NZP6 1156 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 ARMCX1Q9P291 453 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 ARPC4-TTLL3A0A0A6YYG9 625 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 ELOVL7A1L3X0 281 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 SHISA9B4DS77 424 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 MS4A18H0YCH9 400 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 OVOL3O00110 214 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 SNX3O60493 162 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 KRT33AO76009 404 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 OR5F1O95221 314 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 LYPD3O95274 346 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 CD40P25942 277 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 KDELR2P33947 212 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 SELENOPP49908 381 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 ZP4Q12836 540 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 C1DQ13901 141 aaKnown RBP10.91□□□□□ -0.66
LINC00963-217ENST00000624009 MS4A18Q3C1V0 323 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 NIPAL3Q6P499 406 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 TTC33Q6PID6 262 aaPredicted RBP10.91□□□□□ -0.66
LINC00963-217ENST00000624009 KLHL24Q6TFL4 600 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 NHLRC1Q6VVB1 395 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF627Q7L945 461 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 DTX2Q86UW9 622 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 KRTAP1-3Q8IUG1 177 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 P3H2Q8IVL5 708 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 UEVLDQ8IX04 471 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 SLC15A3Q8IY34 581 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 MICU2Q8IYU8 434 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 DEPDC4Q8N2C3 294 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 WDR31Q8NA23 367 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 OR5J2Q8NH18 312 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 ADAD1Q96M93 576 aaKnown RBP10.91□□□□□ -0.66
LINC00963-217ENST00000624009 PRR14Q9BWN1 585 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF229Q9UJW7 825 aa10.91□□□□□ -0.66
LINC00963-217ENST00000624009 CHD3Q12873 2000 aaKnown RBP10.91□□□□□ -0.66
LINC00963-217ENST00000624009 CPSF4LA6NMK7 179 aaKnown RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 PLPP3O14495 311 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 ABCD4O14678 606 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 CLOCKO15516 846 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 PLAUP00749 431 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 THY1P04216 161 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 NQO1P15559 274 aaKnown RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 LSP1P33241 339 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 CLDN17P56750 224 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 RPS4XP62701 263 aaKnown RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 SELENOWP63302 87 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 LTBQ06643 244 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 FOXD4Q12950 439 aaPredicted RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 PMS2P3Q13401 168 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF74Q16587 644 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 HMBOX1Q6NT76 420 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 ANKRD16Q6P6B7 361 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 CARM1Q86X55 608 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 TMEM123Q8N131 208 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 OR4D11Q8NGI4 311 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 OR1K1Q8NGR3 316 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 OR52N5Q8NH56 324 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 RNF217Q8TC41 542 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 SMAP2Q8WU79 429 aaPredicted RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 LIPHQ8WWY8 451 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 GTPBP3Q969Y2 492 aaKnown RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 HS6ST2Q96MM7 605 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 MOGAT1Q96PD6 335 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 OR2M2Q96R28 347 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 NANSQ9NR45 359 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 CMTM6Q9NX76 183 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 CRNNQ9UBG3 495 aaPredicted RBP10.9□□□□□ -0.66
LINC00963-217ENST00000624009 ABCD2Q9UBJ2 740 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 SLC7A7Q9UM01 511 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 SH3GLB1Q9Y371 365 aa10.9□□□□□ -0.66
LINC00963-217ENST00000624009 GMNCA6NCL1 334 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 ZNF99A8MXY4 864 aaPredicted RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 CENPBD1B2RD01 187 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 MT-ND1P03886 318 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 ASAH2BP0C7U1 165 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 IFNA8P32881 189 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 PTH2RP49190 550 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 PGGHGQ32M88 737 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 TBRG1Q3YBR2 411 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 Q5PR19 223 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 ZNF544Q6NX49 715 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 WDR88Q6ZMY6 472 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 TREML1Q86YW5 311 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 RBM45Q8IUH3 476 aaKnown RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 C20orf196Q8IYI0 205 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 POU5F2Q8N7G0 328 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 WFDC11Q8NEX6 87 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
LINC00963-217ENST00000624009 VANGL1Q8TAA9 524 aaPredicted RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 BCL2L2Q92843 193 aaPredicted RBP10.89□□□□□ -0.67
LINC00963-217ENST00000624009 ALKBH3Q96Q83 286 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms