RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	OR1L3	Q8NH93	324 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZFAND1	Q8TCF1	268 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CYB5D2	Q8WUJ1	264 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	HSD17B8	Q92506	261 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MUCL1	Q96DR8	90 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF845	Q96IR2	970 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZBTB45	Q96K62	511 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	FRG2B	Q96QU4	278 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR51J1	Q9H342	316 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RDH14	Q9HBH5	336 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GPR83	Q9NYM4	423 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SLC16A6	O15403	523 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	INSIG1	O15503	277 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	USP2	O75604	605 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	DHRS3	O75911	302 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR2J2	O76002	312 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	C1GALT1C1L	P0DN25	315 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MAPT	P10636	758 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	NMBR	P28336	390 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CSNK1G2	P78368	415 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF266	Q14584	549 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	IZUMO4	Q1ZYL8	232 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR5D16	Q8NGK9	328 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RNF141	Q8WVD5	230 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ARNTL2	Q8WYA1	636 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GPX7	Q96SL4	187 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	C19orf43	Q9BQ61	176 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SGPP1	Q9BX95	441 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	NKX6-2	Q9C056	277 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR51I2	Q9H344	312 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CWH43	Q9H720	699 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	POM121B	A6NF01	834 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CREG1	O75629	220 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	NEURL1	O76050	574 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	AR	P10275	920 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GIPR	P48546	466 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CNN3	Q15417	329 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CDS1	Q92903	461 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SLCO2A1	Q92959	643 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TOE1	Q96GM8	510 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GIMAP2	Q9UG22	337 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SCML1	Q9UN30	329 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ADAMTS5	Q9UNA0	930 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MYO5A	Q9Y4I1	1855 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624		M0R135	149 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GAPDHS	O14556	408 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	HS3ST1	O14792	307 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	HPGDS	O60760	199 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CRYBA1	P05813	215 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	G6PC	P35575	357 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF33B	Q06732	778 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	PDE7A	Q13946	482 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ECM1	Q16610	540 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	COL13A1	Q5TAT6	717 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MAP1S	Q66K74	1059 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GDF6	Q6KF10	455 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZFP62	Q8NB50	900 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GGH	Q92820	318 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CMTM7	Q96FZ5	175 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ZNF799	Q96GE5	643 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	LPAR5	Q9H1C0	372 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR10A5	Q9H207	317 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RHOF	Q9HBH0	211 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	C1GALT1	Q9NS00	363 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SLC22A23	A1A5C7	686 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SSSCA1	O60232	199 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	EDF1	O60869	148 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CLDN11	O75508	207 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	C6orf47	O95873	294 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR4E1	P0C645	316 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	HTR1E	P28566	365 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SORD	Q00796	357 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SHH	Q15465	462 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	TEX44	Q53QW1	395 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CLLU1	Q5K131	121 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CORO6	Q6QEF8	472 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CATSPERG	Q6ZRH7	1159 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	CMTM4	Q8IZR5	234 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	EIF4E3	Q8N5X7	224 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OR8J1	Q8NGP2	316 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ASB17	Q8WXJ9	295 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	B3GNT5	Q9BYG0	378 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	HSD3B7	Q9H2F3	369 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GSX1	Q9H4S2	264 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	OCEL1	Q9H607	264 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RPF2	Q9H7B2	306 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	INIP	Q9NRY2	104 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	AUP1	Q9Y679	476 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SMCHD1	A6NHR9	2005 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	KIAA1551	Q9HCM1	1747 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ABHD2	P08910	425 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	NFYA	P23511	347 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RPS15	P62841	145 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	RPS26	P62854	115 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SIM1	P81133	766 aa	Predicted RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	ENDOG	Q14249	297 aa	Known RBP	3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	MEF2D	Q14814	521 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	GABRA6	Q16445	453 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	DUSP7	Q16829	419 aa		3.81	□□□□□ -1.8
KCNMA1-223	ENST00000604624	SIGIRR	Q6IA17	410 aa		3.81	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms