RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SIAH3Q8IW03 269 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 OR14A16Q8NHC5 309 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 RORBQ92753 470 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MRPS24Q96EL2 167 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DDOQ99489 341 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 CMKLR1Q99788 373 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 CPNE1Q99829 537 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ATF6BQ99941 703 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MSTO1Q9BUK6 570 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 NUDT9Q9BW91 350 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 C1QTNF6Q9BXI9 259 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FGFBP2Q9BYJ0 223 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ATG10Q9H0Y0 220 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ACSS3Q9H6R3 686 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF430Q9H8G1 570 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 WDR54Q9H977 334 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 TPSG1Q9NRR2 321 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC2A8Q9NY64 477 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 RNF181Q9P0P0 153 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4Q9UBX2 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MARCOQ9UEW3 520 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 OPN4Q9UHM6 478 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 KCNG2Q9UJ96 466 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ZDHHC8Q9ULC8 765 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 EP400Q96L91 3159 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC5A10A0PJK1 596 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM90A10PA6NDY2 464 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 D6RAR5 112 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 E9PLN8 166 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NBR2O15453 112 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 XRCC2O43543 280 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 KHDRBS3O75525 346 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CNIH1O95406 144 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CYB5R3P00387 301 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 IGHV2-5P01817 119 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CRYGBP07316 175 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NMBP08949 121 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM87AP0C7U9 286 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 METTL15P1P0C7V9 234 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 ZSCAN5DPP0CG00 497 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TSPAN8P19075 237 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 HOXD9P28356 352 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 GABRR2P28476 465 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CALCRP30988 508 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 RAB5CP51148 216 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TAS2R50P59544 299 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 RPS6P62753 249 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 DEFA5Q01523 94 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 MVKQ03426 396 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 IL18R1Q13478 541 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 EIF4EBP2Q13542 120 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PRPSAP1Q14558 356 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TAF13Q15543 124 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 GABRA6Q16445 453 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF630Q2M218 657 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 FBXW9Q5XUX1 488 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PAMR1Q6UXH9 720 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 QSOX2Q6ZRP7 698 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 OTOP2Q7RTS6 562 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NAA40Q86UY6 237 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 LCORLQ8N3X6 602 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 OR4K15Q8NH41 348 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NETO1Q8TDF5 533 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 C16orf78Q8WTQ4 265 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC38A2Q96QD8 506 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 OR14A2Q96R54 314 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 MCCC1Q96RQ3 725 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NODALQ96S42 347 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 ACOX2Q99424 681 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 EBNA1BP2Q99848 306 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 VKORC1Q9BQB6 163 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC30A2Q9BRI3 323 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 ZFP64Q9NPA5 681 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 USE1Q9NZ43 259 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PDE10AQ9Y233 779 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PIGLQ9Y2B2 252 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 COL1A1P02452 1464 aaPredicted RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 LOC100509620A0A075B734 347 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TRBV7-9A0A0J9YWB2 115 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 A0A1B0GUS0 222 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CXorf65A6NEN9 183 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 EFCAB9A8MZ26 197 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 BLOC1S5-TXNDC5H3BN57 136 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 FABP7O15540 132 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CHST10O43529 356 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 GLUD1P00367 558 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 TCRBP04435 133 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 SERPINE2P07093 398 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NPSP0C0P6 89 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PET100P0DJ07 73 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 GOT1P17174 413 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NMBRP28336 390 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 RPS9P46781 194 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 UQCRFS1P47985 274 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 CCR6P51684 374 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 PRKXP51817 358 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 NAPAP54920 295 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 POLR2LP62875 67 aaKnown RBP4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 MC2RQ01718 297 aa4.57□□□□□ -1.68
SPTBN1-206ENST00000602898 FABP9Q0Z7S8 132 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms