RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 VASH1Q7L8A9 365 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 MARCH9Q86YJ5 346 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 POMGNT2Q8NAT1 580 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 RASL10BQ96S79 203 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 CMKLR1Q99788 373 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 SMURF1Q9HCE7 757 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 TRIM36Q9NQ86 728 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 KLRF1Q9NZS2 232 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 HS3ST3B1Q9Y662 390 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 ALPK2Q86TB3 2170 aa15.41■□□□□ 0.06
SHKBP1-216ENST00000598201 SHISA3A0PJX4 238 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 B4E171 279 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 C11orf98E9PRG8 122 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 DCTN6O00399 190 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 HLA-DPB1P04440 258 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 FBXO45P0C2W1 286 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 COX6A1P12074 109 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF12P17014 697 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 TSPAN7P41732 249 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 HNRNPA0Q13151 305 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 KRR1Q13601 381 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 ATP1A4Q13733 1029 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 TP53I3Q53FA7 332 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC35D3Q5M8T2 416 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 FAM69AQ5T7M9 428 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 MAMDC2Q7Z304 686 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC35F2Q8IXU6 374 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 PARP16Q8N5Y8 322 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 NLGN4YQ8NFZ3 816 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 IMMP1LQ96LU5 166 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 MED18Q9BUE0 208 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 GRHPRQ9UBQ7 328 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 PLEKHB1Q9UF11 243 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 COPS3Q9UNS2 423 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 VDAC3Q9Y277 283 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 GSTK1Q9Y2Q3 226 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 GRIP1Q9Y3R0 1128 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 DCHS1Q96JQ0 3298 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 TAF4O00268 1085 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 GLCEO94923 617 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 MT-ATP6P00846 226 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 OR2T7P0C7T2 308 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 CD40LGP29965 261 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 CAV3P56539 151 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 GPR50Q13585 617 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 IL10RAQ13651 578 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 INPP5JQ15735 1006 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 ARL9Q6T311 187 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 DCDC5Q6ZRR9 648 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 CCDC190Q86UF4 302 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 CENPSQ8N2Z9 138 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 OR2Y1Q8NGV0 311 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 OR2T27Q8NH04 317 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC22A8Q8TCC7 542 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 TMEM234Q8WY98 164 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 ALG12Q9BV10 488 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF700Q9H0M5 742 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 LOXL2Q9Y4K0 774 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 NOX1Q9Y5S8 564 aa15.4■□□□□ 0.06
SHKBP1-216ENST00000598201 SHISA8B8ZZ34 492 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 GRPRP30550 384 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 TMED10P49755 219 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 SLC25A1P53007 311 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 SGCBQ16585 318 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 RGS21Q2M5E4 152 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 GPALPP1Q8IXQ4 340 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF511Q8NB15 262 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 CHPT1Q8WUD6 406 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 ST8SIA1Q92185 356 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 SRA1Q9HD15 236 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 CRNNQ9UBG3 495 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 MASP2O00187 686 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 IL11P20809 199 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 TNFSF8P32971 234 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 HTR3AP46098 478 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 SUMO3P55854 103 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 NTRK2Q16620 822 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 EMC4Q5J8M3 183 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 TUBA3EQ6PEY2 450 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 STK35Q8TDR2 534 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 SPACA9Q96E40 222 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 ARL5BQ96KC2 179 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 COQ7Q99807 217 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 SLX1AQ9BQ83 275 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 METTL7AQ9H8H3 244 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 PPP4R1LQ9P1A2 415 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 PCDHGB6Q9Y5F9 930 aa15.39■□□□□ 0.05
SHKBP1-216ENST00000598201 CPAMD8Q8IZJ3 1885 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 IQCMA0A1B0GVH7 501 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 FTCDNL1E5RQL4 147 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 PLPP2O43688 288 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 ITGA10O75578 1167 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 DXOO77932 396 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 STK17BO94768 372 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 PLGP00747 810 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 ETV6P41212 452 aa15.38■□□□□ 0.05
SHKBP1-216ENST00000598201 ZNF45Q02386 682 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms