RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CYB561A3Q8NBI2 242 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 RCBTB1Q8NDN9 531 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR10H4Q8NGA5 316 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR4E2Q8NGC2 313 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR52E1Q8NGJ3 308 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TMEM163Q8TC26 289 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 GCDHQ92947 438 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TCEAL3Q969E4 200 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SAMD8Q96LT4 415 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 WDFY2Q96P53 400 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 GPR174Q9BXC1 333 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CACNG6Q9BXT2 260 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PCDHB16Q9NRJ7 776 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NPAP1Q9NZP6 1156 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SLC13A4Q9UKG4 626 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CNTRLQ7Z7A1 2325 aa10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MDC1Q14676 2089 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZNF729A6NN14 1252 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 H3BSH0 61 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 EEF1E1O43324 174 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ERGP11308 486 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ARSBP15848 533 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CDK5Q00535 292 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 AGERQ15109 404 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SFTPA2Q8IWL1 248 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SAMD12Q8N8I0 201 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 GDPD1Q8N9F7 314 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR2L3Q8NG85 312 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR51L1Q8NGJ5 315 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 RFT1Q96AA3 541 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FOXRED1Q96CU9 486 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZFP3Q96NJ6 502 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ZNF251Q9BRH9 671 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FUZQ9BT04 418 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PPP1R3EQ9H7J1 279 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ACOXLQ9NUZ1 547 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 CHRNA9Q9UGM1 479 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 APOBEC3BQ9UH17 382 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FBXL4Q9UKA2 621 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 INMT-MINDY4F8WBC2 141 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FABP7O15540 132 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 HSPA12AO43301 675 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PDE9AO76083 593 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 IGHV2-70P01814 119 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PRF1P14222 555 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 S100PP25815 95 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TEKQ02763 1124 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 SRSF5Q13243 272 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 FCN2Q15485 313 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ESCO2Q56NI9 601 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 EOGTQ5NDL2 527 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 GDPGP1Q6ZNW5 385 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 LINC00346Q8IVM7 164 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 TMEM99Q8N816 258 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 BHLHE23Q8NDY6 225 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR52H1Q8NGJ2 320 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 OR13C3Q8NGS6 347 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 ST8SIA4Q92187 359 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 LRFN5Q96NI6 719 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PHF7Q9BWX1 381 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 DPH1Q9BZG8 443 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NGBQ9NPG2 151 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 HIF1ANQ9NWT6 349 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 NCDNQ9UBB6 729 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 MMACHCQ9Y4U1 282 aa10.65□□□□□ -0.7
CDK5RAP3-231ENST00000584063 PRSS38A1L453 326 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ZNF860A6NHJ4 632 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 MAN2B1O00754 1011 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 UBXN7O94888 489 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ZNF10P21506 573 aaPredicted RBP10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 BDKRB2P30411 391 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 RAB13P51153 203 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ZNF155Q12901 538 aaPredicted RBP10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 C1orf61Q13536 156 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 KLHL22Q53GT1 634 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 LAMTOR1Q6IAA8 161 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 CLDN22Q8N7P3 220 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ACOT4Q8N9L9 421 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 KCNE4Q8WWG9 221 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 PATE1Q8WXA2 126 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 MARVELD3Q96A59 401 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ARHGAP9Q9BRR9 750 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 FOXQ1Q9C009 403 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 LMAN1LQ9HAT1 526 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 PELI2Q9HAT8 420 aa10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 HINT3Q9NQE9 182 aaKnown RBP10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 RBFOX1Q9NWB1 397 aaKnown RBP10.65□□□□□ -0.71
CDK5RAP3-231ENST00000584063 BTN3A3O00478 584 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 LY86O95711 162 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 SEMA4FO95754 770 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 THY1P04216 161 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 ALPPP05187 535 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 EIF4EP06730 217 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 IL9P15248 144 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 FRKP42685 505 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 EVX1P49640 407 aa10.64□□□□□ -0.71
CDK5RAP3-231ENST00000584063 PDX1P52945 283 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms