RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 GEMIN6Q8WXD5 167 aaKnown RBP11.71□□□□□ -0.53
RPAIN-216ENST00000575599 ZNF385AQ96PM9 386 aaKnown RBP11.71□□□□□ -0.53
RPAIN-216ENST00000575599 ZNF587Q96SQ5 575 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-216ENST00000575599 EPYCQ99645 322 aa11.71□□□□□ -0.53
RPAIN-216ENST00000575599 SF3B5Q9BWJ5 86 aaKnown RBP11.71□□□□□ -0.53
RPAIN-216ENST00000575599 LIME1Q9H400 295 aa11.71□□□□□ -0.53
RPAIN-216ENST00000575599 DCLRE1BQ9H816 532 aa11.71□□□□□ -0.53
RPAIN-216ENST00000575599 CCM2LQ9NUG4 571 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-216ENST00000575599 SLC7A7Q9UM01 511 aa11.71□□□□□ -0.53
RPAIN-216ENST00000575599 FAM32AQ9Y421 112 aaKnown RBP11.71□□□□□ -0.53
RPAIN-216ENST00000575599 TRAPPC13A5PLN9 417 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 GNGT2O14610 69 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 RAD51DO75771 328 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 VAMP5O95183 116 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 CNOT4O95628 575 aaKnown RBP11.7□□□□□ -0.54
RPAIN-216ENST00000575599 FABP3P05413 133 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 ITGA2P17301 1181 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 COX5AP20674 150 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 GRPRP30550 384 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 DNAJA1P31689 397 aaKnown RBP11.7□□□□□ -0.54
RPAIN-216ENST00000575599 OR1E2P47887 323 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 FAPQ12884 760 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 RCN1Q15293 331 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 WDR88Q6ZMY6 472 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 VTCN1Q7Z7D3 282 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 TSPYL5Q86VY4 417 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-216ENST00000575599 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 DUS3LQ96G46 650 aaKnown RBP11.7□□□□□ -0.54
RPAIN-216ENST00000575599 CHID1Q9BWS9 393 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 OR10A4Q9H209 315 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 ARMC1Q9NVT9 282 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 PARPBPQ9NWS1 579 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 ASB6Q9NWX5 421 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 UPB1Q9UBR1 384 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 RASD1Q9Y272 281 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
RPAIN-216ENST00000575599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-216ENST00000575599 A0A1W2PPR1 153 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 LRRN3E7EW58 273 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 KPNA4O00629 521 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-216ENST00000575599 MGRN1O60291 552 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 THY1P04216 161 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 IFNW1P05000 195 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 FASP25445 335 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 IFNA8P32881 189 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 TAS2R41P59536 307 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 FOXD4Q12950 439 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-216ENST00000575599 RIPK1Q13546 671 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 TAB1Q15750 504 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 TSPO2Q5TGU0 170 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 C9orf135Q5VTT2 229 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 CREB3L2Q70SY1 520 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 CYP4Z1Q86W10 505 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 ZDHHC21Q8IVQ6 265 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 FAM86B1Q8N7N1 296 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 ZIC4Q8N9L1 334 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 MOGAT1Q96PD6 335 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 ASPNQ9BXN1 380 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 MALT1Q9UDY8 824 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 ST6GALNAC2Q9UJ37 374 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 POLQO75417 2590 aa11.69□□□□□ -0.54
RPAIN-216ENST00000575599 CIB4A0PJX0 185 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 TIPRLO75663 272 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 KRT33AO76009 404 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 LYPD3O95274 346 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 BGLAPP02818 100 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF43P17038 809 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 SELENOPP49908 381 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 FOXG1P55316 489 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-216ENST00000575599 CLDN17P56750 224 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 LTBQ06643 244 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 C1DQ13901 141 aaKnown RBP11.68□□□□□ -0.54
RPAIN-216ENST00000575599 MFSD13AQ14CX5 517 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 BEX5Q5H9J7 111 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 TTC33Q6PID6 262 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-216ENST00000575599 H1FNTQ75WM6 255 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-216ENST00000575599 EPHX4Q8IUS5 362 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF433Q8N7K0 673 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-216ENST00000575599 PLPPR2Q96GM1 343 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 SLC41A3Q96GZ6 507 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 ZNF347Q96SE7 839 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 SLCO5A1Q9H2Y9 848 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 PLEKHF2Q9H8W4 249 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 SLC7A10Q9NS82 523 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 TAS2R16Q9NYV7 291 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 B3GALT5Q9Y2C3 310 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 LRBAP50851 2863 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 PDZD2O15018 2839 aa11.68□□□□□ -0.54
RPAIN-216ENST00000575599 ENO4A6NNW6 628 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 KLF4O43474 513 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 FZD7O75084 574 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 DEAF1O75398 565 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-216ENST00000575599 CST1P01037 141 aa11.67□□□□□ -0.54
RPAIN-216ENST00000575599 MT-ND1P03886 318 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms