RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SLC7A7Q9UM01 511 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
CCDC113-203ENST00000561517 ELOVL7A1L3X0 281 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 LRRN3E7EW58 273 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 RPL36A-HNRNPH2H7BZ11 118 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 ABCD4O14678 606 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 KRT33AO76009 404 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 ZNF83P51522 516 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 SLC25A3Q00325 362 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 PUDPQ08623 228 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 TTC33Q6PID6 262 aaPredicted RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 PRSS57Q6UWY2 283 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 HACD2Q6Y1H2 254 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 UEVLDQ8IX04 471 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 OR1K1Q8NGR3 316 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 RADILQ96JH8 1075 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 ALKBH3Q96Q83 286 aaPredicted RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 HOPXQ9BPY8 73 aaPredicted RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 PRSS27Q9BQR3 290 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 SLC19A3Q9BZV2 496 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 POLR2J2Q9GZM3 115 aaKnown RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 POLR2J3Q9H1A7 115 aaKnown RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 EFCAB1Q9HAE3 211 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 OBP2BQ9NPH6 170 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 ZNF701Q9NV72 531 aaPredicted RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 SH3GLB1Q9Y371 365 aa13.56□□□□□ -0.24
CCDC113-203ENST00000561517 MAGED1Q9Y5V3 778 aaPredicted RBP13.56□□□□□ -0.24
CCDC113-203ENST00000561517 TLN2Q9Y4G6 2542 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 CSPG4Q6UVK1 2322 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 OVOL3O00110 214 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 PLPP3O14495 311 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 AKAP8O43823 692 aaKnown RBP13.55□□□□□ -0.24
CCDC113-203ENST00000561517 SNX3O60493 162 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 SLC43A1O75387 559 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 HLA-DOBP13765 273 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 NQO1P15559 274 aaKnown RBP13.55□□□□□ -0.24
CCDC113-203ENST00000561517 DRD4P21917 467 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 CD40P25942 277 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 LSP1P33241 339 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 PTH2RP49190 550 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 SH3BGRP55822 239 aaPredicted RBP13.55□□□□□ -0.24
CCDC113-203ENST00000561517 PRPS1P60891 318 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 ZNF74Q16587 644 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 CYBRD1Q53TN4 286 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 Q5PR19 223 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 C10orf53Q8N6V4 93 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 OR5J2Q8NH18 312 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
CCDC113-203ENST00000561517 SMAP2Q8WU79 429 aaPredicted RBP13.55□□□□□ -0.24
CCDC113-203ENST00000561517 BCL2L2Q92843 193 aaPredicted RBP13.55□□□□□ -0.24
CCDC113-203ENST00000561517 OR2M2Q96R28 347 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 LAMP3Q9UQV4 416 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 NOX1Q9Y5S8 564 aa13.55□□□□□ -0.24
CCDC113-203ENST00000561517 RTTNQ86VV8 2226 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 M0R1B8 84 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 NME4O00746 187 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 OR5F1O95221 314 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 WNT11O96014 354 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 SOD3P08294 240 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 FOSL1P15407 271 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 TNFRSF1BP20333 461 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 RPS4XP62701 263 aaKnown RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 SELENOWP63302 87 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 IL1RL1Q01638 556 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 LIPEQ05469 1076 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 PGGHGQ32M88 737 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 TBRG1Q3YBR2 411 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 LRRC23Q53EV4 343 aaPredicted RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 HIKESHIQ53FT3 197 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 PXKQ7Z7A4 578 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 PIK3C3Q8NEB9 887 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 PERPQ96FX8 193 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 LRR1Q96L50 414 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 C1QTNF6Q9BXI9 259 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 GRIP2Q9C0E4 1043 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 NELFAQ9H3P2 528 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
CCDC113-203ENST00000561517 MEPEQ9NQ76 525 aaPredicted RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 CISD1Q9NZ45 108 aaKnown RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 GMPR2Q9P2T1 348 aaKnown RBP13.54□□□□□ -0.24
CCDC113-203ENST00000561517 ARPC4-TTLL3A0A0A6YYG9 625 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 GMNCA6NCL1 334 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 CH25HO95992 272 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
CCDC113-203ENST00000561517 PAX7P23759 505 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 PRDX6P30041 224 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 RBM34P42696 430 aaKnown RBP13.53□□□□□ -0.24
CCDC113-203ENST00000561517 OR1E2P47887 323 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 SLC7A2P52569 658 aa13.53□□□□□ -0.24
CCDC113-203ENST00000561517 CDH11P55287 796 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms