RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FNDC11Q9BVV2 318 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 TSSK6Q9BXA6 273 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 PINK1Q9BXM7 581 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 RSPO3Q9BXY4 272 aaPredicted RBP9.31□□□□□ -0.92
TPM1-212ENST00000558347 ANGPTL4Q9BY76 406 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 SLC6A15Q9H2J7 730 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 ANKRD19PQ9H560 264 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 COQ3Q9NZJ6 369 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 RHCGQ9UBD6 479 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 WDR45Q9Y484 360 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 FAM215AQ9Y5M1 114 aa9.31□□□□□ -0.92
TPM1-212ENST00000558347 FREM3P0C091 2139 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 IQCMA0A1B0GVH7 501 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 H3BN98 237 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 SNPHO15079 494 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 TO15178 435 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 FCMRO60667 390 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 HCN1O60741 890 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 PPM1BO75688 479 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 GPX5O75715 221 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 TP53P04637 393 aaPredicted RBP9.3□□□□□ -0.92
TPM1-212ENST00000558347 ADRA2AP08913 450 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 COX6B1P14854 86 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 RPS4Y1P22090 263 aaKnown RBP9.3□□□□□ -0.92
TPM1-212ENST00000558347 GDF1P27539 372 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 LCN1P31025 176 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 CASP3P42574 277 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 RORCP51449 518 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 CDK5Q00535 292 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 PMPCAQ10713 525 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM1-212ENST00000558347 C1orf94Q6P1W5 598 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 PODNL1Q6PEZ8 512 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 AKAP14Q86UN6 197 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 ZNF619Q8N2I2 560 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 FAM83FQ8NEG4 500 aaPredicted RBP9.3□□□□□ -0.92
TPM1-212ENST00000558347 OR4D11Q8NGI4 311 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 NEIL3Q8TAT5 605 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 SLC7A13Q8TCU3 470 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 GNPDA2Q8TDQ7 276 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 CA5BP1Q8WTZ4 195 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 HGDQ93099 445 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 SARAFQ96BY9 339 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 OMA1Q96E52 524 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 SECISBP2Q96T21 854 aaKnown RBP9.3□□□□□ -0.92
TPM1-212ENST00000558347 G6PC3Q9BUM1 346 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 ASPNQ9BXN1 380 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 PRRG3Q9BZD7 231 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 UBQLN3Q9H347 655 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 EXO5Q9H790 373 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 MOV10Q9HCE1 1003 aaKnown RBP9.3□□□□□ -0.92
TPM1-212ENST00000558347 FGF20Q9NP95 211 aaPredicted RBP9.3□□□□□ -0.92
TPM1-212ENST00000558347 ACKR4Q9NPB9 350 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 POLE4Q9NR33 117 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 QPCTLQ9NXS2 382 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 TAS2R16Q9NYV7 291 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 CBLCQ9ULV8 474 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 SSR3Q9UNL2 185 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 GRIP1Q9Y3R0 1128 aa9.3□□□□□ -0.92
TPM1-212ENST00000558347 TMEM129A0AVI4 362 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 NKX2-6A6NCS4 301 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 FIGNL2A6NMB9 653 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 MYL12BO14950 172 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 TPST2O60704 377 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 IL1AP01583 271 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 DBIP07108 87 aaKnown RBP9.29□□□□□ -0.92
TPM1-212ENST00000558347 THBS1P07996 1170 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 GAAP10253 952 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 CPEP16870 476 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 FUT4P22083 530 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 PRKAR1BP31321 381 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 PTGER4P35408 488 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 PTGDSP41222 190 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 CRYBB2P43320 205 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 EFNB1P98172 346 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 PLCXD2Q0VAA5 305 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 SELENBP1Q13228 472 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 CCNJQ5T5M9 372 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 OLIG3Q7RTU3 272 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 LURAP1LQ8IV03 231 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 PEX5LQ8IYB4 626 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 CLDN22Q8N7P3 220 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 TCEANCQ8N8B7 351 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 VANGL1Q8TAA9 524 aaPredicted RBP9.29□□□□□ -0.92
TPM1-212ENST00000558347 RND1Q92730 232 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 TMEM41AQ96HV5 264 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 GNRHR2Q96P88 292 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 IL4I1Q96RQ9 567 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 TTYH2Q9BSA4 534 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 MED18Q9BUE0 208 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 RNF167Q9H6Y7 350 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 EVA1AQ9H8M9 152 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 GALNT9Q9HCQ5 603 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 DNAJC27Q9NZQ0 273 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 B4GALT7Q9UBV7 327 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 TESQ9UGI8 421 aaKnown RBP9.29□□□□□ -0.92
TPM1-212ENST00000558347 MRTO4Q9UKD2 239 aaKnown RBP9.29□□□□□ -0.92
TPM1-212ENST00000558347 OR10H1Q9Y4A9 318 aa9.29□□□□□ -0.92
TPM1-212ENST00000558347 PKDREJQ9NTG1 2253 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms