RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MT-ATP6P00846 226 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 THBDP07204 575 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 TSPAN19P0C672 248 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 SSTR2P30874 369 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 YAP1P46937 504 aaKnown RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 UGT2B15P54855 530 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 MXRA7P84157 204 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 MS4A2Q01362 244 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 P2RY6Q15077 328 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 SFRP5Q5T4F7 317 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 FBXW9Q5XUX1 488 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 PGM2L1Q6PCE3 622 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 TTC33Q6PID6 262 aaPredicted RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 SLC46A3Q7Z3Q1 461 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 CXorf67Q86X51 503 aaPredicted RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 LRRC17Q8N6Y2 441 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 PIK3C3Q8NEB9 887 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 TMEM255BQ8WV15 326 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 LIPHQ8WWY8 451 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 PYURFQ96I23 114 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 HS6ST2Q96MM7 605 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 OXGR1Q96P68 337 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 OR10A4Q9H209 315 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 PARPBPQ9NWS1 579 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 NDUFAF4Q9P032 175 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 MALT1Q9UDY8 824 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 PRPF19Q9UMS4 504 aaKnown RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 SAMD4AQ9UPU9 718 aaKnown RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 HTR3EA5X5Y0 456 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 A6NNC1 897 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 CTAG2O75638 210 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 CH25HO95992 272 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 MT-ND1P03886 318 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ASAH2BP0C7U1 165 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 HLA-DOBP13765 273 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 COX5AP20674 150 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ATP6V1B2P21281 511 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 CBLP22681 906 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 IGHV1-2P23083 117 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 FOXG1P55316 489 aaPredicted RBP8.51□□□□□ -1.05
SRP54-210ENST00000556380 VLDLRP98155 873 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 TLE4Q04727 773 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ST3GAL3Q11203 375 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ZP4Q12836 540 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 BNIP1Q12981 228 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ITGADQ13349 1161 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 PMS2P3Q13401 168 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 TRIM25Q14258 630 aaKnown RBP8.51□□□□□ -1.05
SRP54-210ENST00000556380 TSPO2Q5TGU0 170 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ANKRD34AQ69YU3 496 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 FKBP9P1Q75LS8 142 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 GPAT4Q86UL3 456 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 WDFY1Q8IWB7 410 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ZNF100Q8IYN0 542 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ZNF433Q8N7K0 673 aaPredicted RBP8.51□□□□□ -1.05
SRP54-210ENST00000556380 OR5J2Q8NH18 312 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 PFN4Q8NHR9 129 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 TMEM239Q8WW34 195 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 CLPTM1LQ96KA5 538 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 DHRS1Q96LJ7 313 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 NSMCE2Q96MF7 247 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 FUZQ9BT04 418 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 HDHD5Q9BXW7 423 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 KLHL4Q9C0H6 718 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 FKRPQ9H9S5 495 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 NMNAT1Q9HAN9 279 aaPredicted RBP8.51□□□□□ -1.05
SRP54-210ENST00000556380 MCCC2Q9HCC0 563 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 SLC7A10Q9NS82 523 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 C20orf141Q9NUB4 165 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 TAS2R5Q9NYW4 299 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ACTR3BQ9P1U1 418 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 NDRG3Q9UGV2 375 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ZNF229Q9UJW7 825 aa8.51□□□□□ -1.05
SRP54-210ENST00000556380 ANKRD17O75179 2603 aaKnown RBP8.51□□□□□ -1.05
SRP54-210ENST00000556380 CADP27708 2225 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 CSMD2Q7Z408 3487 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 A0A087WUU8 490 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 TCRBV5S2A0A599 114 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ENO4A6NNW6 628 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 DEFB108AA8MXU0 73 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 KPNA4O00629 521 aaPredicted RBP8.5□□□□□ -1.05
SRP54-210ENST00000556380 ACOT8O14734 319 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 KLF4O43474 513 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 GMNNO75496 209 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 PDE5AO76074 875 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 IGHV3-9P01782 118 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ITGA5P08648 1049 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 PPP3CBP16298 524 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 ZNF43P17038 809 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 RHCEP18577 417 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 CRYGSP22914 178 aa8.5□□□□□ -1.05
SRP54-210ENST00000556380 LOXP28300 417 aaPredicted RBP8.5□□□□□ -1.05
SRP54-210ENST00000556380 SELENOPP49908 381 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms