RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IL18R1Q13478 541 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 ATXN7L3Q14CW9 347 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 RCN1Q15293 331 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PPP1R7Q15435 360 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CDKN3Q16667 212 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 EOGTQ5NDL2 527 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 C10orf120Q5SQS8 335 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 PHYHD1Q5SRE7 291 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 DCST2Q5T1A1 773 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 BEND3Q5T5X7 828 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 ZSCAN25Q6NSZ9 544 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 ANKRD37Q7Z713 158 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 DHRSXQ8N5I4 330 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 OR10H4Q8NGA5 316 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 AKR7LQ8NHP1 331 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 C11orf24Q96F05 449 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 SH3YL1Q96HL8 342 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CNDP1Q96KN2 507 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 C7orf34Q96L11 122 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 TCEANC2Q96MN5 208 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 SECISBP2Q96T21 854 aaKnown RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 NPAS2Q99743 824 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CCDC77Q9BR77 488 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 NICN1Q9BSH3 213 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 TUBGCP2Q9BSJ2 902 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 FAM192AQ9GZU8 254 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 GLT8D2Q9H1C3 349 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 SLC25A51Q9H1U9 297 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 APMAPQ9HDC9 416 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 FANCFQ9NPI8 374 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CHRNA9Q9UGM1 479 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CYTH4Q9UIA0 394 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 TBX21Q9UL17 535 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 BARX2Q9UMQ3 279 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 GSTK1Q9Y2Q3 226 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 KLHDC2Q9Y2U9 406 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 EXOSC1Q9Y3B2 195 aaKnown RBP2.41□□□□□ -2.02
SCFD1-210ENST00000553693 NCOR1O75376 2440 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 DOCK1Q14185 1865 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 GAKO14976 1311 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 CLSPNQ9HAW4 1339 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 USP34Q70CQ2 3546 aa2.41□□□□□ -2.02
SCFD1-210ENST00000553693 LRRC37A2A6NM11 1700 aa2.4□□□□□ -2.02
SCFD1-210ENST00000553693 C5orf42Q9H799 3197 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 TRIOO75962 3097 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 A0A1W2PNV4 684 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ESYT2A0FGR8 921 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 OR6C65A6NJZ3 312 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 NPIPA7E9PJI5 369 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 IMPA2O14732 288 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CTAGE5O15320 804 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 TRIM3O75382 744 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 SERPINA3P01011 423 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CHRNA1P02708 482 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 HPNP05981 417 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 HBQ1P09105 142 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 IQCF3P0C7M6 154 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 NPIPA8P0DM63 369 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 RNH1P13489 461 aaKnown RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 IL9P15248 144 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 SDC1P18827 310 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 UQCRC2P22695 453 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CCNCP24863 283 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CCNE1P24864 410 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ANXA13P27216 316 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 BTDP43251 543 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 POU3F4P49335 361 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 PPOXP50336 477 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 RPL23AP62750 156 aaKnown RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 RPL32P62910 135 aaKnown RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CCNA1P78396 465 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CSTF1Q05048 431 aaKnown RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CUL2Q13617 745 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CHI3L2Q15782 390 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 TMEM184AQ6ZMB5 413 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 LANCL3Q6ZV70 420 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 HSD17B13Q7Z5P4 300 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 MOB3BQ86TA1 216 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 PARGQ86W56 976 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 IFNEQ86WN2 208 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CCDC65Q8IXS2 484 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CEP112Q8N8E3 955 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 BBOF1Q8ND07 529 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 OR52K2Q8NGK3 314 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 OR2T3Q8NH03 318 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CNIH3Q8TBE1 160 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ANKRD49Q8WVL7 239 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 ARNTL2Q8WYA1 636 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 AMDHD1Q96NU7 426 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 SMIM14Q96QK8 99 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 PSKH2Q96QS6 385 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 CTRCQ99895 268 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 TMEM43Q9BTV4 400 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 EDEM2Q9BV94 578 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 TM2D1Q9BX74 207 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 DUSP16Q9BY84 665 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 POLR3FQ9H1D9 316 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-210ENST00000553693 PTGES2Q9H7Z7 377 aa2.4□□□□□ -2.03
SCFD1-210ENST00000553693 SGK2Q9HBY8 427 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms