RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 EIF1P41567 113 aaKnown RBP11.51□□□□□ -0.57
PAAF1-214ENST00000544552 CLDN6P56747 220 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 TAS2R43P59537 309 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF85Q03923 595 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 FOXF1Q12946 379 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 KRR1Q13601 381 aaKnown RBP11.51□□□□□ -0.57
PAAF1-214ENST00000544552 DNASE1L3Q13609 305 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 LINC01590Q5TEZ4 76 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 HES3Q5TGS1 186 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 SLC22A10Q63ZE4 541 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 IL20RBQ6UXL0 311 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 WDSUB1Q8N9V3 476 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 NLGN4YQ8NFZ3 816 aaPredicted RBP11.51□□□□□ -0.57
PAAF1-214ENST00000544552 MCFD2Q8NI22 146 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 BORCS5Q969J3 196 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 SLC25A36Q96CQ1 311 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 C1GALT1C1Q96EU7 318 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 SGCZQ96LD1 299 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 TSPAN32Q96QS1 320 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 OR11A1Q9GZK7 315 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 RNF167Q9H6Y7 350 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 EXOSC4Q9NPD3 245 aaKnown RBP11.51□□□□□ -0.57
PAAF1-214ENST00000544552 FANCFQ9NPI8 374 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 TXNL4BQ9NX01 149 aaKnown RBP11.51□□□□□ -0.57
PAAF1-214ENST00000544552 FOXJ2Q9P0K8 574 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
PAAF1-214ENST00000544552 HRH3Q9Y5N1 445 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 SDK2Q58EX2 2172 aa11.51□□□□□ -0.57
PAAF1-214ENST00000544552 A0A087WZY1 265 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 NPIPB13A6NJU9 1138 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 CLDN25C9JDP6 229 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 NPIPB4C9JG80 1138 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 FAM47E-STBD1D6RA91 191 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 TRIM3O75382 744 aaPredicted RBP11.5□□□□□ -0.57
PAAF1-214ENST00000544552 OR6A2O95222 327 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 RENP00797 406 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 HLA-DPB1P04440 258 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 SERPINA7P05543 415 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 OTX2P32243 289 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 SOX6P35712 828 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 RPL27P61353 136 aaKnown RBP11.5□□□□□ -0.57
PAAF1-214ENST00000544552 RPS18P62269 152 aaKnown RBP11.5□□□□□ -0.57
PAAF1-214ENST00000544552 HSF2Q03933 536 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 MESTQ5EB52 335 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 SLC6A19Q695T7 634 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 PLCZ1Q86YW0 608 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 SYS1Q8N2H4 156 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 TMEM156Q8N614 296 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 ATP6V1C2Q8NEY4 427 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 OR2T4Q8NH00 348 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 POC1BQ8TC44 478 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 ZMYND19Q96E35 227 aaPredicted RBP11.5□□□□□ -0.57
PAAF1-214ENST00000544552 MRPL48Q96GC5 212 aaKnown RBP11.5□□□□□ -0.57
PAAF1-214ENST00000544552 NPAS1Q99742 590 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 MED18Q9BUE0 208 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 ALG12Q9BV10 488 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 TXNIPQ9H3M7 391 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 ISG20L2Q9H9L3 353 aaKnown RBP11.5□□□□□ -0.57
PAAF1-214ENST00000544552 HMG20AQ9NP66 347 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 TRIM36Q9NQ86 728 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 VDAC3Q9Y277 283 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 GSTK1Q9Y2Q3 226 aa11.5□□□□□ -0.57
PAAF1-214ENST00000544552 PLPP2O43688 288 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 EFNA2O43921 213 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 SNX4O95219 450 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 IL1AP01583 271 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 TFP02787 698 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 MRPL3P09001 348 aaKnown RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 CELP19835 753 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 OPRL1P41146 370 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 CENPAP49450 140 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ACTA2P62736 377 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 RPS25P62851 125 aaKnown RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ACTG2P63267 376 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 Q0VFX4 171 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF846Q147U1 533 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 H1FNTQ75WM6 255 aaPredicted RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 VASH1Q7L8A9 365 aaPredicted RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 KLBQ86Z14 1044 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 SLC35F2Q8IXU6 374 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF248Q8NDW4 579 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 OR4K17Q8NGC6 315 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF417Q8TAU3 575 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZPLD1Q8TCW7 415 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 SLC25A43Q8WUT9 341 aaPredicted RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZNRF4Q8WWF5 429 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZBTB8AQ96BR9 441 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 FAM122AQ96E09 287 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 TRMT61AQ96FX7 289 aaKnown RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ARL5BQ96KC2 179 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 ZNF587Q96SQ5 575 aaPredicted RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 TBX5Q99593 518 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 WDR12Q9GZL7 423 aaKnown RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 PROK2Q9HC23 129 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 AKIP1Q9NQ31 210 aa11.49□□□□□ -0.57
PAAF1-214ENST00000544552 RPRD1BQ9NQG5 326 aaKnown RBP11.49□□□□□ -0.57
PAAF1-214ENST00000544552 HPF1Q9NWY4 346 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms