RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 RNF115Q9Y4L5 304 aa13.56□□□□□ -0.24
ECHDC2-223ENST00000542552 RPL36A-HNRNPH2H7BZ11 118 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 CXCR6O00574 342 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 HS3ST1O14792 307 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 UPK3AO75631 287 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 IGF2P01344 180 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 CD3EP07766 207 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 THRBP10828 461 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 HLA-DOBP13765 273 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 NQO1P15559 274 aaKnown RBP13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 RBM34P42696 430 aaKnown RBP13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 SLC25A3Q00325 362 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 PUDPQ08623 228 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 ZP4Q12836 540 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 PIN1Q13526 163 aaPredicted RBP13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 PXKQ7Z7A4 578 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 C10orf53Q8N6V4 93 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 ZNF611Q8N823 705 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 OR5J2Q8NH18 312 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 OR52N5Q8NH56 324 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 PIGTQ969N2 578 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 OR2M2Q96R28 347 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 NOX1Q9Y5S8 564 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 MED13LQ71F56 2210 aa13.55□□□□□ -0.24
ECHDC2-223ENST00000542552 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 SLC43A1O75387 559 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 CH25HO95992 272 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 ASAH2BP0C7U1 165 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 TAS2R41P59536 307 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 ZNF672Q499Z4 452 aaPredicted RBP13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 DEF8Q6ZN54 512 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 VTCN1Q7Z7D3 282 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 WDFY1Q8IWB7 410 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 UEVLDQ8IX04 471 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 LRRC17Q8N6Y2 441 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 OR1K1Q8NGR3 316 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 AKAP1Q92667 903 aaKnown RBP eCLIP13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 LRRC37BQ96QE4 947 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 SPAG4Q9NPE6 437 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 TAS2R5Q9NYW4 299 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 ZNF229Q9UJW7 825 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 A4GNTQ9UNA3 340 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 AMDHD2Q9Y303 409 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 PLCE1Q9P212 2302 aa13.54□□□□□ -0.24
ECHDC2-223ENST00000542552 ARID1AO14497 2285 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 A0A1W2PR80 420 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 KPNA4O00629 521 aaPredicted RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 GSTA4O15217 222 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 AKAP8O43823 692 aaKnown RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 DCTN3O75935 186 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 KRT33AO76009 404 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 MT-ND1P03886 318 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 HOXC12P31275 282 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 UGT2B15P54855 530 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 POU3F1Q03052 451 aaPredicted RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 FXNQ16595 210 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 HIKESHIQ53FT3 197 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 TMEM108Q6UXF1 575 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 KRTAP1-3Q8IUG1 177 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 PIK3C3Q8NEB9 887 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 MAGEE2Q8TD90 523 aaPredicted RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 TMEM255BQ8WV15 326 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 LIPHQ8WWY8 451 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 TXNDC15Q96J42 360 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 LRR1Q96L50 414 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 CCT8L2Q96SF2 557 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 CCL19Q99731 98 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 NELFAQ9H3P2 528 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 GPR35Q9HC97 309 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 NANSQ9NR45 359 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 ARL8BQ9NVJ2 186 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 SNX13Q9Y5W8 968 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 MTORP42345 2549 aa13.53□□□□□ -0.24
ECHDC2-223ENST00000542552 ACANP16112 2415 aa13.52□□□□□ -0.24
ECHDC2-223ENST00000542552 SLC35F4A4IF30 521 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 SHISA9B4DS77 424 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 CLOCKO15516 846 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 TMCC2O75069 709 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 SERPINA1P01009 418 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 TSPAN19P0C672 248 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 ADORA3P0DMS8 318 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 PAX1P15863 534 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 FUT4P22083 530 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 PTAFRP25105 342 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 CD40P25942 277 aa13.52□□□□□ -0.25
ECHDC2-223ENST00000542552 ZNF83P51522 516 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms