RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 hCG_2039718K7EN88 272 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 DCTN6O00399 190 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 DYNC1I1O14576 645 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 INPP4BO15327 924 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ENSAO43768 121 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 MPDU1O75352 247 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SEMA3DO95025 777 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 DEXIO95424 95 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 PSMG1O95456 288 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 NSA2O95478 260 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SYF2O95926 243 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 IFNA6P05013 189 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SERPINA5P05154 406 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RHOCP08134 193 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOLGA8HP0CJ92 632 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SMIM10L1P0DMW3 83 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF7P17097 686 aaPredicted RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 COX5AP20674 150 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SERPINA2P20848 420 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 CEACAM8P31997 349 aaPredicted RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 HMGCLP35914 325 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ARR3P36575 388 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RFC3P40938 356 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RANBP1P43487 201 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 PRLHRP49683 370 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ARPC4P59998 168 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPS14P62263 151 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPL10AP62906 217 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RPL8P62917 257 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF85Q03923 595 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF33BQ06732 778 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 C2orf80Q0P641 193 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 BNIP2Q12982 314 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 GNMTQ14749 295 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 MAD2L1BPQ15013 274 aaPredicted RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 DGUOKQ16854 277 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SIRPB2Q5JXA9 342 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 IDNKQ5T6J7 187 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 HECTD2Q5U5R9 776 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 EMBQ6PCB8 327 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 TUBA3EQ6PEY2 450 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF66Q6ZN08 573 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 PGAP1Q75T13 922 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SSX6Q7RTT6 188 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 EID2Q8N6I1 236 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF114Q8NC26 417 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACER1Q8TDN7 264 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 IL1F10Q8WWZ1 152 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 SMIM10Q96HG1 83 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ITCHQ96J02 903 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 OXGR1Q96P68 337 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 CIB1Q99828 191 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 QTRT1Q9BXR0 403 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 NAT10Q9H0A0 1025 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR51V1Q9H2C8 321 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 FKRPQ9H9S5 495 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 NMUR1Q9HB89 426 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 MRPL40Q9NQ50 206 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ABCB10Q9NRK6 738 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 MCUBQ9NWR8 336 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 HRASLS2Q9NWW9 162 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 OCIAD1Q9NX40 245 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 TUBA8Q9NY65 449 aaPredicted RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 NUDT4Q9NZJ9 180 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 CD274Q9NZQ7 290 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 CCDC59Q9P031 241 aaKnown RBP3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 LRRC42Q9Y546 428 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 RAD50Q92878 1312 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF521Q96K83 1311 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 CKAP5Q14008 2032 aa3.36□□□□□ -1.87
RNU4-60P-201ENST00000517239 TRBV7-9A0A0J9YWB2 115 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF724A8MTY0 619 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 LRRN3E7EW58 273 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 GOLGA6L19H0YKK7 550 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 CLDN34H7C241 214 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 GFYI3L273 518 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 TYROBPO43914 113 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 BCAR3O75815 825 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 LYPLA2O95372 231 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 HLA-GP17693 338 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR1E1P30953 314 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 GPR183P32249 361 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 GSSP48637 474 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 DNASE1L1P49184 302 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 FBXW4P57775 412 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 AP3S2P59780 193 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTBP60709 375 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTA2P62736 377 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTG1P63261 375 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTG2P63267 376 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTC1P68032 377 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ACTA1P68133 377 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 SRSF1Q07955 248 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 DLG1Q12959 904 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 TPBGQ13641 420 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 NFATC4Q14934 902 aa3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 DAZAP2Q15038 168 aaPredicted RBP3.35□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNHIT3Q15649 155 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms