RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 WFDC8Q8IUA0 241 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 NKAIN4Q8IVV8 208 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 VANGL1Q8TAA9 524 aaPredicted RBP8.52□□□□□ -1.05
RNF4-221ENST00000513643 MAGEE2Q8TD90 523 aaPredicted RBP8.52□□□□□ -1.05
RNF4-221ENST00000513643 SLC26A7Q8TE54 656 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 BCL2L2Q92843 193 aaPredicted RBP8.52□□□□□ -1.05
RNF4-221ENST00000513643 LRR1Q96L50 414 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 FAM107BQ9H098 131 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 NELFAQ9H3P2 528 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 FKRPQ9H9S5 495 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 SPAG4Q9NPE6 437 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 SLC17A5Q9NRA2 495 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 MAN2C1Q9NTJ4 1040 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 ARL8BQ9NVJ2 186 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 RIMS3Q9UJD0 308 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 ZNF229Q9UJW7 825 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 EDARQ9UNE0 448 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 SNX13Q9Y5W8 968 aa8.52□□□□□ -1.05
RNF4-221ENST00000513643 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
RNF4-221ENST00000513643 NF1P21359 2839 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 HTR3EA5X5Y0 456 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 SHISA9B4DS77 424 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 TMCC2O75069 709 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 RAD51DO75771 328 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 FAM107AO95990 144 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 MT-ND1P03886 318 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 DANCRP0C864 163 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 HSD17B1P14061 328 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 HOXB1P14653 301 aaPredicted RBP8.51□□□□□ -1.05
RNF4-221ENST00000513643 DNASE1P24855 282 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 HOXC12P31275 282 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 SLC25A3Q00325 362 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 LGALS3BPQ08380 585 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 PUDPQ08623 228 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 FHL1Q13642 323 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 PPA1Q15181 289 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 C20orf204Q6ZNR8 217 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 VTCN1Q7Z7D3 282 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 C20orf196Q8IYI0 205 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 UBE2J2Q8N2K1 259 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 LRRC17Q8N6Y2 441 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 ZNF611Q8N823 705 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 FAM169BQ8N8A8 192 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 OR5J2Q8NH18 312 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 TXNDC15Q96J42 360 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 C7orf34Q96L11 122 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 LRRC37BQ96QE4 947 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 OR2M2Q96R28 347 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 SEPHS2Q99611 448 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 GORASP2Q9H8Y8 452 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 OBP2BQ9NPH6 170 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 DCAF13Q9NV06 445 aaKnown RBP8.51□□□□□ -1.05
RNF4-221ENST00000513643 BEX4Q9NWD9 120 aaPredicted RBP8.51□□□□□ -1.05
RNF4-221ENST00000513643 SELENONQ9NZV5 590 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 CRNNQ9UBG3 495 aaPredicted RBP8.51□□□□□ -1.05
RNF4-221ENST00000513643 TAGLN3Q9UI15 199 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 NOX1Q9Y5S8 564 aa8.51□□□□□ -1.05
RNF4-221ENST00000513643 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 ANK3Q12955 4377 aaKnown RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 ARPC4-TTLL3A0A0A6YYG9 625 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 OVOL3O00110 214 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 HS3ST1O14792 307 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 DCTN3O75935 186 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 CH25HO95992 272 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 SEMG1P04279 462 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 T-ENOLP0DO92 83 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 CBLP22681 906 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 ART1P52961 327 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 UGT2B15P54855 530 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 CLDN17P56750 224 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 LSM11P83369 360 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNF4-221ENST00000513643 TGFBR3Q03167 851 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 BSPH1Q075Z2 132 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 PMS2P3Q13401 168 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 STK11Q15831 433 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 SPATS1Q496A3 300 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 LRRC23Q53EV4 343 aaPredicted RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 PHYHD1Q5SRE7 291 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 NIPAL3Q6P499 406 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 TTC33Q6PID6 262 aaPredicted RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 ABHD12BQ7Z5M8 362 aaPredicted RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 OFCC1Q8IZS5 231 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 PGAM4Q8N0Y7 254 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 OR1K1Q8NGR3 316 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 OR6X1Q8NH79 312 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 TMEM255BQ8WV15 326 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 TMEM239Q8WW34 195 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 MUCL1Q96DR8 90 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 PRRC1Q96M27 445 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 HS6ST2Q96MM7 605 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 TMUB1Q9BVT8 246 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 ASPNQ9BXN1 380 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 GRIP2Q9C0E4 1043 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 ESRP2Q9H6T0 727 aaKnown RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 GPR35Q9HC97 309 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 NGBQ9NPG2 151 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 C20orf141Q9NUB4 165 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms