RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 ST8SIA1Q92185 356 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 PIGKQ92643 395 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 TAAR8Q969N4 342 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 PELI1Q96FA3 418 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 ZC3H10Q96K80 434 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 Q96M85 177 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 DEPDC7Q96QD5 511 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 SNX18Q96RF0 628 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 SOSTQ9BQB4 213 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 NEURL2Q9BR09 285 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 MESP1Q9BRJ9 268 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 TTYH2Q9BSA4 534 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 ALG12Q9BV10 488 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 HDHD5Q9BXW7 423 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC7A5P2Q9GIP4 190 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 TPK1Q9H3S4 243 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 RERGLQ9H628 205 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 GAREM1Q9H706 876 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 ACOXLQ9NUZ1 547 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 C14orf119Q9NWQ9 140 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 TAS2R10Q9NYW0 307 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 NXT1Q9UKK6 140 aaKnown RBP4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 COPS3Q9UNS2 423 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 MOKQ9UQ07 419 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 GRIP1Q9Y3R0 1128 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 PCDHGB7Q9Y5F8 929 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 PCDH15Q96QU1 1955 aa4.32□□□□□ -1.72
PDLIM5-214ENST00000510099 SCN2AQ99250 2005 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TRIOO75962 3097 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 IGLV3-32A0A0A0MS00 114 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TMED7-TICAM2A0A0A6YYA0 188 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TRAV1-2A0A0B4J238 106 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TRBV11-1A0A0K0K1C0 115 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SMIM30A4D0T7 59 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 ANKRD61A6NGH8 418 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 NPIPB13A6NJU9 1138 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 A8MVM7 634 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 B4DXG7 233 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 NPIPB4C9JG80 1138 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 FTCDNL1E5RQL4 147 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 BLOC1S5-TXNDC5H3BN57 136 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 KHNYNO15037 678 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SSX4O60224 188 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 GPRIN2O60269 458 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 ZNF354AO60765 605 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC19A2O60779 497 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC25A12O75746 678 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SERPINI2O75830 405 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 GATBO75879 557 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 NCR1O76036 304 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 DKK1O94907 266 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 WISP1O95388 367 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 AHSA1O95433 338 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SERPINA3P01011 423 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 APOA1P02647 267 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 CSF3P09919 207 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 UCHL1P09936 223 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 FBXO45P0C2W1 286 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 NAGAP17050 411 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 PRKCAP17252 672 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 MYL9P24844 172 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 CXCR1P25024 350 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 ITPKBP27987 946 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 GRPRP30550 384 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 THBS2P35442 1172 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 RPS5P46782 204 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TMED10P49755 219 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 GDI2P50395 445 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 DUSP3P51452 185 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 GBX2P52951 348 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 EMP2P54851 167 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 FBXW4P57775 412 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SIRPAP78324 504 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC3A1Q07837 685 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 MRPL28Q13084 256 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 IL11RAQ14626 422 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 BAK1Q16611 211 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 COL28A1Q2UY09 1125 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TP53I3Q53FA7 332 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 C4orf48Q5BLP8 95 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 FAM27D1Q5T7N8 215 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 EEF1A1P5Q5VTE0 462 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 C1orf140Q5VVS0 124 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC6A19Q695T7 634 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 LCN10Q6JVE6 187 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SFXN4Q6P4A7 337 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 MZT2AQ6P582 158 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 RPL22L1Q6P5R6 122 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 CNIH2Q6PI25 160 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 SLC23A3Q6PIS1 610 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 LYPD4Q6UWN0 246 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 LYPD8Q6UX82 237 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 FAM131AQ6UXB0 335 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 GDPD3Q7L5L3 318 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 MAMDC2Q7Z304 686 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 CPEB2Q7Z5Q1 589 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 TPRA1Q86W33 373 aa4.31□□□□□ -1.72
PDLIM5-214ENST00000510099 BPHLQ86WA6 291 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms