RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 A0A0G2JK05 382 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 C4orf47A7E2U8 309 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 KHNYNO15037 678 aaKnown RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 NCR1O76036 304 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 SHC1P29353 583 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 CD97P48960 835 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 RPS11P62280 158 aaKnown RBP eCLIP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 C17orf67Q0P5P2 114 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 EEF1A1P5Q5VTE0 462 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 NLGN4YQ8NFZ3 816 aaPredicted RBP15.99■□□□□ 0.15
SFXN1-208ENST00000507823 CHAC2Q8WUX2 184 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 MNTQ99583 582 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 TTYH2Q9BSA4 534 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 ZCCHC4Q9H5U6 513 aa15.99■□□□□ 0.15
SFXN1-208ENST00000507823 MEN1O00255 615 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 GPRIN2O60269 458 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 THBS2P35442 1172 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 COL28A1Q2UY09 1125 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 ACSM3Q53FZ2 586 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 UNQ9370/PRO34162Q6UXP9 181 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 KCTD20Q7Z5Y7 419 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 CEACAM19Q7Z692 300 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 OR6K6Q8NGW6 343 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 OR2T4Q8NH00 348 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 HAVCR2Q8TDQ0 301 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 SNX33Q8WV41 574 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 TMEM234Q8WY98 164 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 PHYHIPQ92561 330 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 RNF31Q96EP0 1072 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 RXFP3Q9NSD7 469 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 C19orf25Q9UFG5 118 aaPredicted RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 ZNF346Q9UL40 294 aaKnown RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 TECTAO75443 2155 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 IGLV3-32A0A0A0MS00 114 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 TRBV11-1A0A0K0K1C0 115 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 PATE3B3GLJ2 98 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 B4DXG7 233 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 SLC19A2O60779 497 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 FZD7O75084 574 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 CPNE3O75131 537 aaKnown RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 SLC25A12O75746 678 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 GATBO75879 557 aaKnown RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 NUDT14O95848 222 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 HLA-DQB1P01920 261 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 GDI2P50395 445 aaKnown RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 FBXW4P57775 412 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 C1orf140Q5VVS0 124 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 C16orf47Q6ZP98 133 aaPredicted RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 OR8H2Q8N162 312 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 OR2I1PQ8NGU4 316 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 ZNF519Q8TB69 540 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 THAP4Q8WY91 577 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 COMMD3Q9UBI1 195 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 NXT1Q9UKK6 140 aaKnown RBP15.98■□□□□ 0.15
SFXN1-208ENST00000507823 FBXO4Q9UKT5 387 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 B3GALT1Q9Y5Z6 326 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 LOC102723996A0A087X1L8 192 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 ANKRD61A6NGH8 418 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 FTCDNL1E5RQL4 147 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 DKK1O94907 266 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 APOA1P02647 267 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 CSF3P09919 207 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 ACVR1BP36896 505 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 ASAH1Q13510 395 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 SLC6A19Q695T7 634 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 CDC20BQ86Y33 519 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 HTRA1Q92743 480 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 CRB3Q9BUF7 120 aa15.98■□□□□ 0.15
SFXN1-208ENST00000507823 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 BOLA2-SMG1P6H3BVE0 249 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 DCTN6O00399 190 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 HPGDSO60760 199 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 UCHL1P09936 223 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 PRKCAP17252 672 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 MYL9P24844 172 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 CNIH2Q6PI25 160 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 LYPD4Q6UWN0 246 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 CCBE1Q6UXH8 406 aaPredicted RBP15.97■□□□□ 0.15
SFXN1-208ENST00000507823 OR6V1Q8N148 313 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.97■□□□□ 0.15
SFXN1-208ENST00000507823 ACOXLQ9NUZ1 547 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 MRPL39Q9NYK5 338 aaKnown RBP15.97■□□□□ 0.15
SFXN1-208ENST00000507823 ADAM30Q9UKF2 790 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 PRR32B1ATL7 298 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 OR2T1O43869 369 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 ZFAND5O76080 213 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 DLGAP3O95886 979 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 RENP00797 406 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 DAB2P98082 770 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 MRPL28Q13084 256 aaKnown RBP15.97■□□□□ 0.15
SFXN1-208ENST00000507823 PHF19Q5T6S3 580 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 FAM27D1Q5T7N8 215 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 GHDCQ8N2G8 530 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 TSSK2Q96PF2 358 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 TIGARQ9NQ88 270 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 INIPQ9NRY2 104 aa15.97■□□□□ 0.15
SFXN1-208ENST00000507823 A0A1W2PQ09 198 aa15.96■□□□□ 0.15
SFXN1-208ENST00000507823 MAGEB4O15481 346 aaPredicted RBP15.96■□□□□ 0.15
SFXN1-208ENST00000507823 ABHD16AO95870 558 aa15.96■□□□□ 0.15
SFXN1-208ENST00000507823 SCN1BQ07699 218 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms