RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PSMC3IPQ9P2W1 217 aaPredicted RBP16.22■□□□□ 0.19
SORT1-203ENST00000471996 TBK1Q9UHD2 729 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 NOTCH1P46531 2555 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 A0A1W2PPW3 197 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 ZNF99A8MXY4 864 aaPredicted RBP16.21■□□□□ 0.19
SORT1-203ENST00000471996 RNASET2O00584 256 aaKnown RBP16.21■□□□□ 0.19
SORT1-203ENST00000471996 SEC14L2O76054 403 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 RNASE1P07998 156 aaKnown RBP16.21■□□□□ 0.19
SORT1-203ENST00000471996 TFPTP0C1Z6 253 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 ZNF43P17038 809 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 GCH1P30793 250 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 CCT5P48643 541 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 GSG1Q2KHT4 349 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 C1orf140Q5VVS0 124 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 OR4F3Q6IEY1 312 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 TREML1Q86YW5 311 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 C10orf107Q8IVU9 208 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 FNDC5Q8NAU1 212 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 OR4A15Q8NGL6 344 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 GPA33Q99795 319 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 PRDM4Q9UKN5 801 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 PYCARDQ9ULZ3 195 aa16.21■□□□□ 0.19
SORT1-203ENST00000471996 NPIPB7O75200 414 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 CD79AP11912 226 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 UQCRC2P22695 453 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 CRHR1P34998 444 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 CRYBB2P43320 205 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 GALK2Q01415 458 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 BAMBIQ13145 260 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 GNA13Q14344 377 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 MRPL2Q5T653 305 aaKnown RBP16.2■□□□□ 0.18
SORT1-203ENST00000471996 SAXO2Q658L1 398 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 ZCCHC23Q6ZST2 131 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 C3orf30Q96M34 536 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 SLC38A1Q9H2H9 487 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 WIPI2Q9Y4P8 454 aa16.2■□□□□ 0.18
SORT1-203ENST00000471996 DSPPQ9NZW4 1301 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 C17orf100A8MU93 164 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 CHRNGP07510 517 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 PNMTP11086 282 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 G6PDP11413 515 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 IL7RP16871 459 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 RAD52P43351 418 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 CCL8P80075 99 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 PIGFQ07326 219 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 NKPD1Q17RQ9 610 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 ALKBH6Q3KRA9 238 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 RETREG3Q86VR2 466 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 ZNF440Q8IYI8 595 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 PIK3C3Q8NEB9 887 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 TAF15Q92804 592 aaKnown RBP eCLIP16.19■□□□□ 0.18
SORT1-203ENST00000471996 SLC25A28Q96A46 364 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 TRNT1Q96Q11 434 aaKnown RBP16.19■□□□□ 0.18
SORT1-203ENST00000471996 PKP2Q99959 881 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 HINT3Q9NQE9 182 aaKnown RBP16.19■□□□□ 0.18
SORT1-203ENST00000471996 B3GAT1Q9P2W7 334 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 ZNF69Q9UC07 566 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 NUP50Q9UKX7 468 aa16.19■□□□□ 0.18
SORT1-203ENST00000471996 FTCDNL1E5RQL4 147 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 CLDN34H7C241 214 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 HMGN4O00479 90 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 RIPK2O43353 540 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 TRIM13O60858 407 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 MDKP21741 143 aaPredicted RBP16.18■□□□□ 0.18
SORT1-203ENST00000471996 RPS4Y1P22090 263 aaKnown RBP16.18■□□□□ 0.18
SORT1-203ENST00000471996 CLDN8P56748 225 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 TEKQ02763 1124 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 CKAP4Q07065 602 aaKnown RBP16.18■□□□□ 0.18
SORT1-203ENST00000471996 SYPL1Q16563 259 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 PCGF3Q3KNV8 242 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 WBP2NLQ6ICG8 309 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 LEG1Q6P5S2 330 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 CADM2Q8N3J6 435 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 ANKFN1Q8N957 763 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 MFSD8Q8NHS3 518 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 MGARPQ8TDB4 240 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 POP5Q969H6 163 aaKnown RBP16.18■□□□□ 0.18
SORT1-203ENST00000471996 NEURL3Q96EH8 262 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 ZNF48Q96MX3 618 aaPredicted RBP16.18■□□□□ 0.18
SORT1-203ENST00000471996 OXGR1Q96P68 337 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 DPY30Q9C005 99 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 MTHFD2LQ9H903 347 aaPredicted RBP16.18■□□□□ 0.18
SORT1-203ENST00000471996 RLIMQ9NVW2 624 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 NKIRAS2Q9NYR9 191 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 PLEK2Q9NYT0 353 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 TAAR3PQ9P1P4 343 aa16.18■□□□□ 0.18
SORT1-203ENST00000471996 A0A096LPI6 279 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 IGHV1-69-2A0A0G2JMI3 117 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 CLDN25C9JDP6 229 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 AHSA1O95433 338 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 GKN3PP0CG01 181 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 ACAA2P42765 397 aaKnown RBP16.17■□□□□ 0.18
SORT1-203ENST00000471996 PTDSS1P48651 473 aaKnown RBP16.17■□□□□ 0.18
SORT1-203ENST00000471996 LCN2P80188 198 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 PCLAFQ15004 111 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 PHYHD1Q5SRE7 291 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 TMEM154Q6P9G4 183 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 LRRC74BQ6ZQY2 392 aa16.17■□□□□ 0.18
SORT1-203ENST00000471996 TRMT10CQ7L0Y3 403 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms