RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SLC6A7Q99884 636 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 MMP27Q9H306 513 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 CDC42EP4Q9H3Q1 356 aaKnown RBP3.55□□□□□ -1.84
SSR3-204ENST00000467733 TSPY26PQ9H489 355 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 DDX31Q9H8H2 851 aaKnown RBP3.55□□□□□ -1.84
SSR3-204ENST00000467733 FKRPQ9H9S5 495 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 SDHAF3Q9NRP4 125 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 FAM120CQ9NX05 1096 aaKnown RBP3.55□□□□□ -1.84
SSR3-204ENST00000467733 MED11Q9P086 117 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 CTNNAL1Q9UBT7 734 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 SLC25A15Q9Y619 301 aa3.55□□□□□ -1.84
SSR3-204ENST00000467733 A0A087WZY1 265 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 NCF1BA6NI72 391 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 NCF1CA8MVU1 366 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 ATP6V1G2-DDX39BF2Z307 99 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 GOLGA6L19H0YKK7 550 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 M0R1B8 84 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 ACOT8O14734 319 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 TNFRSF13BO14836 293 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 PIN1P1O15428 100 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 FADS1O60427 444 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 PDE5AO76074 875 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 SEMA3DO95025 777 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 MBD3O95983 291 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 PNPP00491 289 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 TFP02787 698 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 YES1P07947 543 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 MSMBP08118 114 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 LYL1P12980 280 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 NCF1P14598 390 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 DAOP14920 347 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 ARSBP15848 533 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 PGAM1P18669 254 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 RFX2P48378 723 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 PPOXP50336 477 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 IDH3GP51553 393 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 MVDP53602 400 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 GPX6P59796 221 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 PHEXP78562 749 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 CUL3Q13618 768 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 TRIP10Q15642 601 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 FBXO48Q5FWF7 155 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 ASPHD1Q5U4P2 390 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 SULT1C3Q6IMI6 304 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 Q6ZTK2 550 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 FCRLAQ7L513 359 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 GSTA5Q7RTV2 222 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 LRRC70Q7Z2Q7 622 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 MOGAT3Q86VF5 341 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 TUSC5Q8IXB3 177 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 CCDC170Q8IYT3 715 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 SYCE1Q8N0S2 351 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 SCAIQ8N9R8 606 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 SYT14Q8NB59 555 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 OR52N5Q8NH56 324 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 OR51F2Q8NH61 342 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 CEP70Q8NHQ1 597 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 FAM110BQ8TC76 370 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 ZNF675Q8TD23 568 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 OSTF1Q92882 214 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 ERP27Q96DN0 273 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 HES6Q96HZ4 224 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 KLHL15Q96M94 604 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 RNF145Q96MT1 663 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 NAP1L3Q99457 506 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 MTERF1Q99551 399 aaKnown RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 SRXN1Q9BYN0 137 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 RTN4RQ9BZR6 473 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 TMEM185BQ9H7F4 350 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 ACSS1Q9NUB1 689 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 DDX28Q9NUL7 540 aaKnown RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 UPB1Q9UBR1 384 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 FBXO9Q9UK97 447 aaPredicted RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 VDAC3Q9Y277 283 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
SSR3-204ENST00000467733 RYR2Q92736 4967 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 STAB2Q8WWQ8 2551 aa3.54□□□□□ -1.84
SSR3-204ENST00000467733 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 CCT8L1PA6NM43 557 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 B9A039 149 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 STX16-NPEPL1H3BU86 382 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 M0QZ24 198 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 FOXE1O00358 373 aaPredicted RBP3.53□□□□□ -1.84
SSR3-204ENST00000467733 STX16O14662 325 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 RGS14O43566 566 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 KERAO60938 352 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 RAD51DO75771 328 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 BCAS2O75934 225 aaPredicted RBP3.53□□□□□ -1.84
SSR3-204ENST00000467733 GAS8-AS1O95177 125 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 SLU7O95391 586 aaKnown RBP3.53□□□□□ -1.84
SSR3-204ENST00000467733 TTC4O95801 387 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 BCL10O95999 233 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 GBAP04062 536 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 ERCC1P07992 297 aaPredicted RBP3.53□□□□□ -1.84
SSR3-204ENST00000467733 CSF1P09603 554 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 NUDT17P0C025 328 aa3.53□□□□□ -1.84
SSR3-204ENST00000467733 DDX5P17844 614 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms