RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PHYHIPQ92561 330 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 ZNF524Q96C55 264 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 SLC19A3Q9BZV2 496 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 ACTR6Q9GZN1 396 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 OR10A4Q9H209 315 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 FKRPQ9H9S5 495 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 ELF5Q9UKW6 265 aaPredicted RBP10.76□□□□□ -0.69
CD44-209ENST00000433892 CYP8B1Q9UNU6 501 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 BRWD1Q9NSI6 2320 aa10.76□□□□□ -0.69
CD44-209ENST00000433892 A0A1B0GTH9 108 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 A0A1W2PQ72 361 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 H3BSH0 61 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 GMFGO60234 142 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 PEX14O75381 377 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 TOXO94900 526 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 CD14P08571 375 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 SSTR2P30874 369 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 PPM1FP49593 454 aaPredicted RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 VEGFCP49767 419 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ZP1P60852 638 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 IL10RAQ13651 578 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.75□□□□□ -0.69
CD44-209ENST00000433892 ISXQ2M1V0 245 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ALG10Q5BKT4 473 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 WBP2NLQ6ICG8 309 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 FAM122BQ7Z309 247 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 FGD2Q7Z6J4 655 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ATG4DQ86TL0 474 aaPredicted RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 OR8H3Q8N146 312 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ZNF321PQ8N8H1 164 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ZSCAN1Q8NBB4 408 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 SYNPRQ8TBG9 265 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 C17orf50Q8WW18 174 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 DNAJA3Q96EY1 480 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 TOE1Q96GM8 510 aaKnown RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 MAP6Q96JE9 813 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ADAD1Q96M93 576 aaKnown RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 CMTM3Q96MX0 182 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 GPX7Q96SL4 187 aaPredicted RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 KLHDC3Q9BQ90 382 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 DLL4Q9NR61 685 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 FRRS1LQ9P0K9 344 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 OR5V1Q9UGF6 321 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 MRM2Q9UI43 246 aaKnown RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 COL4A2P08572 1712 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 TVP23AA6NH52 213 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 LEUTXA8MZ59 168 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 GABARAPH6UMI1 98 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 ZNF749O43361 778 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 SRPX2O60687 465 aaPredicted RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 KHDRBS3O75525 346 aaKnown RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 ITGA10O75578 1167 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 UPK3AO75631 287 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 RAF1P04049 648 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 CLPSP04118 112 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 TPOP07202 933 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 DNASE1P24855 282 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 MST1P26927 711 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 RPS27P42677 84 aaKnown RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 PTH2RP49190 550 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 SELENOPP49908 381 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 SKP1P63208 163 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 EGR4Q05215 589 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 LGALSLQ3ZCW2 172 aaPredicted RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 PWWP2BQ6NUJ5 590 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 FAAP20Q6NZ36 180 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 APOOLQ6UXV4 268 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 STAC2Q6ZMT1 411 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 SLC16A9Q7RTY1 509 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 DNAAF1Q8NEP3 725 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 C1orf216Q8TAB5 229 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 FCAMRQ8WWV6 532 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 HGDQ93099 445 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 S100A16Q96FQ6 103 aaKnown RBP10.75□□□□□ -0.69
CD44-209ENST00000433892 HEXA-AS1Q9H8Q6 139 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 TCF7L1Q9HCS4 588 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 MMP25Q9NPA2 562 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 B3GNT2Q9NY97 397 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 KLHL9Q9P2J3 617 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 CD207Q9UJ71 328 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 HIF3AQ9Y2N7 669 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 CACNA1CQ13936 2221 aa10.75□□□□□ -0.69
CD44-209ENST00000433892 A0A1B0GVI7 797 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 C17orf105B2RV13 164 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 KRT33AO76009 404 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 SLC22A5O76082 557 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 NSA2O95478 260 aaKnown RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 TACSTD2P09758 323 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 PNMTP11086 282 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 UBL4AP11441 157 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ADRA2CP18825 462 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 PSMB1P20618 241 aaKnown RBP10.74□□□□□ -0.69
CD44-209ENST00000433892 SDHAP31040 664 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 ZNF81P51508 661 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 LTBQ06643 244 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 SKP2Q13309 424 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 TMEM69Q5SWH9 247 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 FAM69AQ5T7M9 428 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 Q6ZTK2 550 aa10.74□□□□□ -0.69
CD44-209ENST00000433892 FAM220AQ7Z4H9 259 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms