RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 SLC6A15Q9H2J7 730 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 ELOVL3Q9HB03 270 aa14.81□□□□□ -0.04
PCDH1-203ENST00000394536 RP1L1Q8IWN7 2480 aaPredicted RBP14.8□□□□□ -0.04
PCDH1-203ENST00000394536 TCRBV21S2A2A0A5A6 115 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 RAP2BP61225 183 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 RAB11BQ15907 218 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 CLPPQ16740 277 aaPredicted RBP14.8□□□□□ -0.04
PCDH1-203ENST00000394536 OR6V1Q8N148 313 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 PLPP7Q8NBV4 271 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 RCBTB1Q8NDN9 531 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 OR4C3Q8NH37 302 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 ZC3HAV1LQ96H79 300 aaKnown RBP14.8□□□□□ -0.04
PCDH1-203ENST00000394536 MYADMQ96S97 322 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 DPYSL5Q9BPU6 564 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF350Q9GZX5 532 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 BHLHE40O14503 412 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 SLC16A7O60669 478 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 PRAMEF2O60811 474 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 GIMD1P0DJR0 217 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 SELENOPP49908 381 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 BTG2P78543 158 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 SPOCK1Q08629 439 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 TNK1Q13470 666 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 CBFBQ13951 182 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 NFATC4Q14934 902 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 GSG1Q2KHT4 349 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 LINC00303Q3SY05 128 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 Q499Y3 187 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 PLA1AQ53H76 456 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 GLT8D1Q68CQ7 371 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 CD200R1LQ6Q8B3 271 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 KLHL24Q6TFL4 600 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 RASGRP3Q8IV61 690 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 GLB1L2Q8IW92 636 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 OR2L13Q8N349 312 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 KDM8Q8N371 416 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 RPP25Q9BUL9 199 aaKnown RBP14.8□□□□□ -0.04
PCDH1-203ENST00000394536 POTEKPQ9BYX7 375 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 MCOLN1Q9GZU1 580 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 GDE1Q9NZC3 331 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 TMEM14AQ9Y6G1 99 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 C17orf105B2RV13 164 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 S1PR1P21453 382 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 MMP15P51511 669 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF136P52737 540 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 KIAA0907Q7Z7F0 614 aaPredicted RBP14.8□□□□□ -0.04
PCDH1-203ENST00000394536 OR51S1Q8NGJ8 323 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 SMIM4Q8WVI0 70 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF707Q96C28 371 aaPredicted RBP14.8□□□□□ -0.04
PCDH1-203ENST00000394536 KLHL15Q96M94 604 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 CES1P1Q9UKY3 287 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 SLC6A5Q9Y345 797 aa14.8□□□□□ -0.04
PCDH1-203ENST00000394536 A0A0J9YY10 115 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 PRICKLE3O43900 615 aaPredicted RBP14.79□□□□□ -0.04
PCDH1-203ENST00000394536 ZFPL1O95159 310 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 TPOP07202 933 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 GP1BBP13224 206 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 DIO1P49895 249 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 RAB12Q6IQ22 244 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 ZCCHC12Q6PEW1 402 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 PARM1Q6UWI2 310 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 SHISA6Q6ZSJ9 500 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 NR2C2APQ86WQ0 139 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 OR11H4Q8NGC9 324 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 RSC1A1Q92681 617 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 OR2S2Q9NQN1 319 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 PTTG3PQ9NZH4 202 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 SERINC4A6NH21 518 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 GABARAPH6UMI1 98 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 M0QYG6 137 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 AKR1C4P17516 323 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 Q6ZTK2 550 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 TMPRSS11FQ6ZWK6 438 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 INTS14Q96SY0 518 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 DHRS9Q9BPW9 319 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 AICDAQ9GZX7 198 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 DLL4Q9NR61 685 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 BPTFQ12830 3046 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 THY1P04216 161 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 RAB40ALP0C0E4 278 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 ANKRD34CP0C6C1 535 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 SFTPA2Q8IWL1 248 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 ZNF417Q8TAU3 575 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 THAP6Q8TBB0 222 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 RAB40AQ8WXH6 277 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 S100A13Q99584 98 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 PRODH2Q9UF12 536 aa14.79□□□□□ -0.04
PCDH1-203ENST00000394536 NR0B1P51843 470 aaKnown RBP14.78□□□□□ -0.04
PCDH1-203ENST00000394536 LGALSLQ3ZCW2 172 aaPredicted RBP14.78□□□□□ -0.04
PCDH1-203ENST00000394536 ARSKQ6UWY0 536 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 LMX1AQ8TE12 382 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 RLN3Q8WXF3 142 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 HSD17B8Q92506 261 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 COPS7AQ9UBW8 275 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 NUP50Q9UKX7 468 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 KNTC1P50748 2209 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 OR6C68A6NDL8 312 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 BRINP1O60477 761 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 OR1D4P47884 311 aa14.78□□□□□ -0.04
PCDH1-203ENST00000394536 EEF1A1P68104 462 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms