RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 IL34Q6ZMJ4 242 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PGAP1Q75T13 922 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CBARPQ8N350 705 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 MSI2Q96DH6 328 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 RNF170Q96K19 258 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CGGBP1Q9UFW8 167 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1W2PPH5 198 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1W2PPV4 95 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 OR2T1O43869 369 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 NTN1O95631 604 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 AKR1C1Q04828 323 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MEPCEQ7L2J0 689 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 KCNJ15Q99712 375 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 PPIL3Q9H2H8 161 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MYNNQ9NPC7 610 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 PUS1Q9Y606 427 aaKnown RBP eCLIP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 IDSB3KWA1 339 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ABLIM3O94929 683 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 C7P10643 843 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MAP2K3P46734 347 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 FJX1Q86VR8 437 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 FAM71CQ8NEG0 241 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 BSCL2Q96G97 398 aaPredicted RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 PBDC1Q9BVG4 233 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 RNF150Q9ULK6 438 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 QDPRP09417 244 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 PRSS3P35030 304 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MAELQ96JY0 434 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SEMA4GQ9NTN9 838 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MRPL22Q9NWU5 206 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MGST1P10620 155 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SNTB1Q13884 538 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 THSD4Q6ZMP0 1018 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SUN5Q8TC36 379 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 H3BNX3 289 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MBTPS2O43462 519 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 IFNA10P01566 189 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ZGLP1P0C6A0 271 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 BLVRBP30043 206 aaPredicted RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 FOXL2P58012 376 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MFAP5Q13361 173 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 HES3Q5TGS1 186 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 CISD2Q8N5K1 135 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 OR11G2Q8NGC1 345 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 CNOT9Q92600 299 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 NRTNQ99748 197 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 GINS3Q9BRX5 216 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 C1QTNF2Q9BXJ5 285 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 B4GALT3O60512 393 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 GPX3P22352 226 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 LTBQ06643 244 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 OR10X1Q8NGY0 326 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SLC39A13Q96H72 371 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ERVMER34-1Q9H9K5 563 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 HS3ST3A1Q9Y663 406 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 YES1P07947 543 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 HTR3AP46098 478 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 NDUFA6P56556 154 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ARHGAP11BQ3KRB8 267 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 USP51Q70EK9 711 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 METTL25Q8N6Q8 603 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 PAQR8Q8TEZ7 354 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 LINC01599Q8WXQ3 324 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 CD320Q9NPF0 282 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 STEAP1Q9UHE8 339 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ARPC1BO15143 372 aaKnown RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 MMP2P08253 660 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SLC19A1P41440 591 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 F2RL1P55085 397 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 SLC35A1P78382 337 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 AGAP6Q5VW22 663 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF300Q96RE9 604 aaPredicted RBP7.19□□□□□ -1.26
SCN9A-201ENST00000303354 FUNDC2Q9BWH2 189 aa7.19□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF732B4DXR9 585 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 DEGS1O15121 323 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SURF4O15260 269 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 FBXO24O75426 580 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 CD63P08962 238 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ALDOCP09972 364 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 PFN3P60673 137 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 EXOSC2Q13868 293 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC16A11Q8NCK7 471 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 GAB3Q8WWW8 586 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC19A3Q9BZV2 496 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC22A5O76082 557 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC2A10O95528 541 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ONECUT2O95948 504 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 PCBD1P61457 104 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 GK3PQ14409 553 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM92Q6UXU6 159 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ANKRD33Q7Z3H0 272 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 FYTTD1Q96QD9 318 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 CHST6Q9GZX3 395 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 PARP12Q9H0J9 701 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 GFYI3L273 518 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 RETP07949 1114 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 RNF4P78317 190 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM52BQ4KMG9 183 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms