RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 GGTLC2Q14390 218 aa18.95■□□□□ 0.62
YBX3-202ENST00000279550 LEG1Q6P5S2 330 aa18.95■□□□□ 0.62
YBX3-202ENST00000279550 LYPD4Q6UWN0 246 aa18.95■□□□□ 0.62
YBX3-202ENST00000279550 NUP54Q7Z3B4 507 aa18.95■□□□□ 0.62
YBX3-202ENST00000279550 KIAA1143Q96AT1 154 aaPredicted RBP18.95■□□□□ 0.62
YBX3-202ENST00000279550 TTTY10Q9BZA0 68 aa18.95■□□□□ 0.62
YBX3-202ENST00000279550 SMURF1Q9HCE7 757 aa18.95■□□□□ 0.62
YBX3-202ENST00000279550 A0A075B6Q4 140 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 DVL2O14641 736 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 NPIPB7O75200 414 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 SULT1C4O75897 302 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 ICAM2P13598 275 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 BDH1Q02338 343 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 POU4F2Q12837 409 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 RAB43Q86YS6 212 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 EXD3Q8N9H8 876 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 ADAMTS17Q8TE56 1095 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 TSPAN32Q96QS1 320 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 HDHD5Q9BXW7 423 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 NUAK2Q9H093 628 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 SIAEQ9HAT2 523 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 PEX16Q9Y5Y5 336 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 ASPMQ8IZT6 3477 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 SMIM30A4D0T7 59 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 ANKUB1A6NFN9 424 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 MASP2O00187 686 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 SELENOFO60613 162 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 OR2J2O76002 312 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 TXNDC12O95881 172 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 IL1AP01583 271 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 APEHP13798 732 aaKnown RBP18.94■□□□□ 0.62
YBX3-202ENST00000279550 CD40LGP29965 261 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 FGF9P31371 208 aaPredicted RBP18.94■□□□□ 0.62
YBX3-202ENST00000279550 PYCR1P32322 319 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 SDC2P34741 201 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 OR12D2P58182 307 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 GRINAQ7Z429 371 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 MISPQ8IVT2 679 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 TMCO6Q96DC7 493 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 C4orf36Q96KX1 117 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 KCTD7Q96MP8 289 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 CNN2Q99439 309 aaKnown RBP18.94■□□□□ 0.62
YBX3-202ENST00000279550 OR11A1Q9GZK7 315 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 TPK1Q9H3S4 243 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 MED11Q9P086 117 aa18.94■□□□□ 0.62
YBX3-202ENST00000279550 ZNF346Q9UL40 294 aaKnown RBP18.94■□□□□ 0.62
YBX3-202ENST00000279550 CPAMD8Q8IZJ3 1885 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 CD8B2A6NJW9 211 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 FAM171A2A8MVW0 826 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 J3QLW9 94 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 GABRPO00591 440 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 MAGEB4O15481 346 aaPredicted RBP18.93■□□□□ 0.62
YBX3-202ENST00000279550 RNF13O43567 381 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 MT-ND5P03915 603 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 CD8BP10966 210 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 ZNF19P17023 458 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 NAGAP17050 411 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 SDHAP31040 664 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 PTGDSP41222 190 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 RORCP51449 518 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 ACTC1P68032 377 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 ACTA1P68133 377 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 LGALS3BPQ08380 585 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 ATP1A4Q13733 1029 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 MESTQ5EB52 335 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 LCN1P1Q5VSP4 162 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 TMEM91Q6ZNR0 172 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 SLC35F2Q8IXU6 374 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 OR5J2Q8NH18 312 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 SLC25A46Q96AG3 418 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 SLC25A36Q96CQ1 311 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 CCDC86Q9H6F5 360 aaKnown RBP18.93■□□□□ 0.62
YBX3-202ENST00000279550 GALNT8Q9NY28 637 aa18.93■□□□□ 0.62
YBX3-202ENST00000279550 PCSK5Q92824 1860 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 TRABD2BA6NFA1 517 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 H7C1C5 153 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 SLC25A12O75746 678 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 HIST1H2ABP04908 130 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 ZNF12P17014 697 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 S100A5P33763 92 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 PPP5CP53041 499 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 LCN6P62502 163 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 HNRNPA0Q13151 305 aaKnown RBP18.92■□□□□ 0.62
YBX3-202ENST00000279550 KRR1Q13601 381 aaKnown RBP18.92■□□□□ 0.62
YBX3-202ENST00000279550 PON3Q15166 354 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.92■□□□□ 0.623e-7■■□□□ 14.4
YBX3-202ENST00000279550 LINC01590Q5TEZ4 76 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 C1orf140Q5VVS0 124 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 HIST3H2AQ7L7L0 130 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 VASH1Q7L8A9 365 aaPredicted RBP18.92■□□□□ 0.62
YBX3-202ENST00000279550 JAZF1Q86VZ6 243 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 CENPSQ8N2Z9 138 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 OR10G3Q8NGC4 313 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 HIST1H2ACQ93077 130 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 NXPE2Q96DL1 559 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 TSSK2Q96PF2 358 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 MED18Q9BUE0 208 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 RPRD1BQ9NQG5 326 aaKnown RBP18.92■□□□□ 0.62
YBX3-202ENST00000279550 TAS2R5Q9NYW4 299 aa18.92■□□□□ 0.62
YBX3-202ENST00000279550 COPS3Q9UNS2 423 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms