RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 PmpcaQ9DC61 524 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Chrm3Q9ERZ3 589 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Nectin3Q9JLB9 549 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Npas3Q9QZQ0 925 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Slc22a21Q9WTN6 564 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 ClcnkaQ9WUB7 687 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ramp2Q9WUP0 189 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Med13Q5SWW4 2171 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Cacna1aP97445 2368 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ankrd12G5E893 2041 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tex264E9Q137 309 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 H2-ObO35424 271 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Hmgn2P09602 90 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Rpl7P14148 270 aaKnown RBP19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Pcmt1P23506 227 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Hrh3P58406 445 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Eci3Q78JN3 317 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 DgkzQ80UP3 929 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Clic5Q8BXK9 251 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 MepeQ8K4L6 441 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mapre2Q8R001 326 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Angptl7Q8R1Q3 337 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Grk5Q8VEB1 590 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr488Q8VG02 314 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gjc3Q921C1 269 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mgst3Q9CPU4 153 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Btnl10Q9JK39 275 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Hipk2Q9QZR5 1196 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Spint2Q9WU03 252 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Kcnk7Q9Z2T1 307 aa19.24■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr1205A2ATJ7 307 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 ChrndP02716 520 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Grxcr2Q3TYR5 254 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gm4951Q3UED7 406 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Bod1Q5SQY2 173 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Slc35f4Q8BZK4 485 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Padi6Q8K3V4 682 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Vmn1r208Q8R275 308 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Paip1Q8VE62 400 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Cdhr5Q8VHF2 831 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Far1Q922J9 515 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Polr2hQ923G2 150 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mrpl43Q99N89 183 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Fundc2Q9D6K8 151 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ing1Q9QXV3 279 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Wif1Q9WUA1 379 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Slc7a5Q9Z127 512 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Padi1Q9Z185 662 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 AcacaQ5SWU9 2345 aa19.23■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Zbtb25G3UW50 439 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Zfp275G3X904 499 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 DbtP53395 482 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 BmxP97504 651 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gm732Q3V0P9 516 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Slc29a2Q61672 456 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Prap1Q80XD8 149 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ddhd2Q80Y98 699 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Fbxw13Q8BI57 466 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Prox2Q8BII1 593 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Baiap2Q8BKX1 535 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Dkk4Q8VEJ3 221 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr922Q8VG50 311 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 4933402D24RikQ9D4D3 167 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Nmrk2Q9D7C9 195 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Shisa5Q9D7I0 235 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Lyzl6Q9DA11 148 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Wwp2Q9DBH0 870 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Zfp292Q9Z2U2 2698 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 IghdA0A0A6YW14 291 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 MiipA2A7Y5 387 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Zfp229E9PWT2 705 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Vmn1r167G3UW71 315 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 CtseP70269 397 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 CrxosQ3UL53 246 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 IspdQ5RJG7 447 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Elavl2Q60899 360 aaKnown RBP19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ahsa2Q8N9S3 331 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 RorbQ8R1B8 470 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr668Q8VGW3 318 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr622Q8VGY7 317 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mrgpra3Q91WW3 302 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Fank1Q9DAM9 344 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Serpini2Q9JK88 405 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 HaspinQ9Z0R0 754 aa19.22■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gm42421F6X8D5 166 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gm6614M0QWR8 670 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Rhox6O70238 227 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Dync1i2O88487 612 aaKnown RBP19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tuba3aP05214 450 aaKnown RBP19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Zfp36P22893 319 aaKnown RBP19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Fxyd2Q04646 70 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tcfl5Q32NY8 489 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mrgprb2Q3KNA1 338 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 P4ha2Q60716 537 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Alg8Q6P8H8 526 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gpr6Q6YNI2 363 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 BpifcQ8C186 509 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Dppa4Q8CCG4 296 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Nmral1Q8K2T1 309 aa19.21■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Armcx6Q8K3A6 301 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms