RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ackr3P56485 362 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Wfdc5Q4KXB6 126 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc16a11Q5NC32 447 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Sema3bQ62177 748 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Med22Q62276 200 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm5416Q6IE28 97 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Tas2r117Q7M715 330 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Dsg1cQ7TSF0 911 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Enkd1Q7TSV9 346 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Flrt3Q8BGT1 649 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 BmfQ91ZE9 185 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ca13Q9D6N1 262 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gtf2e2Q9D902 292 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Phf7Q9DAG9 307 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Wwtr1Q9EPK5 395 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Fgf20Q9ESL9 211 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc7a5Q9Z127 512 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Loxl3Q9Z175 754 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Exph5Q0VAV2 1960 aa20.65■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Igkv12-44A0A140T8M2 115 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Pcdh17E9PXF0 1157 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr1121L7MTT1 314 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 P01638 115 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Hsd3b3P26150 373 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Pou3f4P62515 361 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Tnfrsf26P83626 204 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 DtymkP97930 212 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Col10a1Q05306 680 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 BC061237Q6P8I2 184 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr298Q7TS06 332 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Fam181bQ80VF6 417 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Thnsl2Q80W22 483 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gm21627Q810R0 219 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Mal2Q8BI08 175 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Pamr1Q8BU25 720 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Gpr107Q8BUV8 551 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Synpo2lQ8BWB1 975 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Lysmd4Q8CC84 293 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Slc25a1Q8JZU2 311 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr658Q8VGV5 323 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Olfr572Q8VGZ3 318 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Dapl1Q9D757 107 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Isyna1Q9JHU9 557 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Ntn4Q9JI33 628 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Plag1Q9QYE0 499 aa20.64■□□□□ 0.9
Scn1b-201ENSMUST00000098548 Trip12G5E870 2025 aaKnown RBP20.64■□□□□ 0.89
Scn1b-201ENSMUST00000098548 IghdA0A0A6YW14 291 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Dcaf10A2AKB9 566 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Pip5k1cO70161 661 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 P03987 398 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 FapP97321 761 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Il9rQ01114 468 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Snx33Q4VAA7 574 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Lacc1Q8BZT9 430 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Cbr3Q8K354 277 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Irf2bplQ8K3X4 775 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr170Q8VGL6 313 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tmem53Q9D0Z3 276 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Alg2Q9DBE8 415 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Krt81Q9ERE2 481 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Lancl2Q9JJK2 450 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Kcnk7Q9Z2T1 307 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Scn2aA0A0J9YTW6 2006 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Urb1Q571H0 2274 aaKnown RBP20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 MyofQ69ZN7 2048 aaKnown RBP20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 A0A286YDU1 74 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Smok4aA0JLX3 433 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr66F8VQ01 311 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Shisa8J3QNX5 399 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 MbpP04370 250 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Zdhhc2P59267 366 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 MakQ04859 622 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr18Q0VAX9 331 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Secisbp2Q3U1C4 858 aaKnown RBP20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Nutm2Q3V0C3 733 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 P4ha2Q60716 537 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Usf1Q61069 310 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Rnf220Q6PDX6 566 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 PigvQ7TPN3 493 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Ptbp3Q8BHD7 523 aaKnown RBP20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Fbxw13Q8BI57 466 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Fam180aQ8BR21 173 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Apoa5Q8C7G5 368 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Vmn1r83Q8R287 306 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr61Q8VGM2 311 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Spred1Q924S8 444 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tssk6Q925K9 273 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 BlvraQ9CY64 295 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Slc22a21Q9WTN6 564 aa20.63■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Celsr1O35161 3034 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Skint9A7TZG3 319 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Pdzd8B9EJ80 1147 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Alx4O35137 399 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Csf2P01587 141 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gna13P27601 377 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gcnt2P97402 401 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Htr1fQ02284 366 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Zfp41Q02526 198 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm7030Q0WXH6 285 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gcnt7Q3V3K7 433 aa20.62■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms