RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	CSNK1A1L	Q8N752	337 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	C15orf54	Q8N8G6	183 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR4D5	Q8NGN0	318 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TSG101	Q99816	390 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	MAGT1	Q9H0U3	335 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	NXF3	Q9H4D5	531 aa	Known RBP	4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CWH43	Q9H720	699 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	LRRC40	Q9H9A6	602 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SLC2A6	Q9UGQ3	507 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	UBQLN1	Q9UMX0	589 aa	Known RBP	4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	NPIPA1	Q9UND3	350 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	RASD1	Q9Y272	281 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OARD1	Q9Y530	152 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SLCO1B1	Q9Y6L6	691 aa		4.63	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SMIM28	A0A1B0GU29	152 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	EFCAB7	A8K855	629 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392		A8MX80	341 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	NUDT21	O43809	227 aa	Known RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	ZNF354A	O60765	605 aa	Predicted RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TSC22D2	O75157	780 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CRLF1	O75462	422 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SCRG1	O75711	98 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	PALM	O75781	387 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TNNC2	P02585	160 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CD55	P08174	381 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	H2AFZ	P0C0S5	128 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	HOXB8	P17481	243 aa	Predicted RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	MMP11	P24347	488 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR1G1	P47890	313 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	IST1	P53990	364 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	LRRC63	Q05C16	580 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	C1orf61	Q13536	156 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	RUNX3	Q13761	415 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SLC10A1	Q14973	349 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	PDK3	Q15120	406 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	NDUFA9	Q16795	377 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR8G2P	Q6IF36	304 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	ALKAL1	Q6UXT8	129 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	APTX	Q7Z2E3	356 aa	Known RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SLC39A11	Q8N1S5	342 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	GPD1L	Q8N335	351 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392		Q8N9G6	341 aa	Predicted RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR5L2	Q8NGL0	311 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR1F12	Q8NHA8	337 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	ANKRD36BP1	Q96IX9	119 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CCT7	Q99832	543 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	BLZF1	Q9H2G9	400 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	PNO1	Q9NRX1	252 aa	Known RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	UFSP2	Q9NUQ7	469 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	COX16	Q9P0S2	106 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	PCSK1N	Q9UHG2	260 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	LCMT1	Q9UIC8	334 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	ADAM28	Q9UKQ2	775 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CLEC4A	Q9UMR7	237 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SAMD4A	Q9UPU9	718 aa	Known RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	MTCH2	Q9Y6C9	303 aa		4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	LAMA2	P24043	3122 aa	Known RBP	4.62	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CHD9	Q3L8U1	2897 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TRANK1	O15050	2925 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TRAV26-1	A0A087WT03	109 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392		A0A1W2PQ72	361 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392		H3BMQ9	156 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CETN3	O15182	167 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	KLRC4	O43908	158 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	GNA14	O95837	355 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	GATA1	P15976	413 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	IGHV1-2	P23083	117 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	GATA2	P23769	480 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	PTBP1	P26599	531 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	IL2RG	P31785	369 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CD80	P33681	288 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SLC11A1	P49279	550 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	STAR	P49675	285 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	AIF1	P55008	147 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SMARCB1	Q12824	385 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SLC22A6	Q4U2R8	563 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TMEM225	Q6GV28	225 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CDR2L	Q86X02	465 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR10A7	Q8NGE5	316 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	OR8J1	Q8NGP2	316 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	VN1R17P	Q8TDU5	208 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SCFD1	Q8WVM8	642 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	IL1F10	Q8WWZ1	152 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	GON7	Q9BXV9	100 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	PPDPF	Q9H3Y8	114 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	AGPAT3	Q9NRZ7	376 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	RBAK	Q9NYW8	714 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	RIMS3	Q9UJD0	308 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	ANGPTL2	Q9UKU9	493 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	HPCAL4	Q9UM19	191 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	SCML2	Q9UQR0	700 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	TRAF3IP3	Q9Y228	551 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	RRP15	Q9Y3B9	282 aa	Known RBP	4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	HES2	Q9Y543	173 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	CSAG2	Q9Y5P2	127 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	MYH11	P35749	1972 aa		4.61	□□□□□ -1.67
SMARCA2-240	ENST00000635392	RALGAPA2	Q2PPJ7	1873 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms